FFCP PHASE1:Hg19::chr2:210798655..210798664,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:210798655..210798664,+ | |||
|coexpression_cluster_id=C2686 | |coexpression_cluster_id=C2686 | ||
|description=CAGE_peak_at_chr2:210798655..210798664,+ | |description=CAGE_peak_at_chr2:210798655..210798664,+ | ||
|id=chr2:210798655..210798664,+ | |id=chr2:210798655..210798664,+ | ||
|ontology_enrichment_celltype=CL:0000064!2.47e-22!3;CL:0005012!2.47e-22!3;CL:0000067!2.47e-22!3;CL:0002304!2.47e-22!3;CL:0002319!5.89e-12!25;CL:0002605!2.59e-10!3;CL:0000243!4.71e-10!15;CL:0000125!4.71e-10!15;CL:0000030!4.71e-10!15;CL:0000339!4.71e-10!15;CL:0000133!6.63e-10!59;CL:0000128!1.05e-09!7;CL:0000126!1.05e-09!7;CL:0000127!1.05e-09!7;CL:0002453!1.05e-09!7;CL:0000095!5.66e-09!17;CL:0000123!5.66e-09!17;CL:0000342!2.89e-08!1;CL:0002565!2.89e-08!1;CL:0000221!5.33e-08!71;CL:0000306!8.25e-08!4;CL:0002222!8.25e-08!4;CL:0002224!8.25e-08!4 | |ontology_enrichment_celltype=CL:0000064!2.47e-22!3;CL:0005012!2.47e-22!3;CL:0000067!2.47e-22!3;CL:0002304!2.47e-22!3;CL:0002319!5.89e-12!25;CL:0002605!2.59e-10!3;CL:0000243!4.71e-10!15;CL:0000125!4.71e-10!15;CL:0000030!4.71e-10!15;CL:0000339!4.71e-10!15;CL:0000133!6.63e-10!59;CL:0000128!1.05e-09!7;CL:0000126!1.05e-09!7;CL:0000127!1.05e-09!7;CL:0002453!1.05e-09!7;CL:0000095!5.66e-09!17;CL:0000123!5.66e-09!17;CL:0000342!2.89e-08!1;CL:0002565!2.89e-08!1;CL:0000221!5.33e-08!71;CL:0000306!8.25e-08!4;CL:0002222!8.25e-08!4;CL:0002224!8.25e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.74e-50;2!CL:0000064;5.96e-34;3!CL:0000067;5.96e-34;3!CL:0005012;5.96e-34;3!CL:0002304;5.96e-34;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.96e-34,3;CL:0000067,5.96e-34,3;CL:0005012,5.96e-34,3;CL:0002304,5.96e-34,3;CL:0000047,9.39e-14,8;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!7.66e-29!4;UBERON:0007625!1.32e-22!11;UBERON:0001778!2.47e-22!3;UBERON:0001775!2.47e-22!3;UBERON:0003075!1.37e-19!86;UBERON:0007284!1.37e-19!86;UBERON:0002203!2.59e-19!6;UBERON:0001768!2.59e-19!6;UBERON:0002346!1.39e-18!90;UBERON:0001017!9.54e-18!82;UBERON:0001801!1.16e-17!14;UBERON:0000153!3.79e-17!129;UBERON:0007811!3.79e-17!129;UBERON:0005743!8.46e-17!86;UBERON:0000033!3.81e-16!123;UBERON:0004121!2.80e-15!169;UBERON:0000073!5.94e-15!94;UBERON:0001016!5.94e-15!94;UBERON:0000924!7.75e-15!173;UBERON:0006601!7.75e-15!173;UBERON:0004733!3.68e-14!12;UBERON:0002028!3.68e-14!12;UBERON:0007277!3.68e-14!12;UBERON:0000955!9.90e-14!69;UBERON:0006238!9.90e-14!69;UBERON:0004732!4.65e-13!13;UBERON:0000019!6.98e-13!19;UBERON:0000047!6.98e-13!19;UBERON:0004088!6.98e-13!19;UBERON:0003072!6.98e-13!19;UBERON:0003071!6.98e-13!19;UBERON:0004128!6.98e-13!19;UBERON:0002680!1.45e-12!9;UBERON:0001895!1.45e-12!9;UBERON:0010092!1.45e-12!9;UBERON:0000970!3.26e-12!20;UBERON:0003056!1.31e-11!61;UBERON:0002104!1.32e-11!21;UBERON:0001456!1.32e-11!21;UBERON:0003076!2.70e-11!15;UBERON:0003057!2.70e-11!15;UBERON:0002037!3.49e-11!6;UBERON:0006215!3.49e-11!6;UBERON:0002200!1.31e-10!11;UBERON:0006876!1.31e-10!11;UBERON:0000020!1.50e-10!23;UBERON:0001049!3.91e-10!57;UBERON:0005068!3.91e-10!57;UBERON:0006241!3.91e-10!57;UBERON:0007135!3.91e-10!57;UBERON:0001032!4.34e-10!24;UBERON:0004456!4.34e-10!24;UBERON:0002616!9.66e-10!59;UBERON:0002506!2.89e-08!1;UBERON:0001769!2.89e-08!1;UBERON:0005085!2.96e-08!29;UBERON:0007190!3.83e-08!1;UBERON:0002363!4.11e-08!1;UBERON:0007647!4.11e-08!1;UBERON:0010115!4.11e-08!1;UBERON:0002581!6.68e-08!1;UBERON:0010077!8.25e-08!4;UBERON:0005389!8.25e-08!4;UBERON:0000484!8.25e-08!4;UBERON:0002546!8.25e-08!4;UBERON:0000965!8.25e-08!4;UBERON:0001803!8.25e-08!4;UBERON:0003073!8.25e-08!4;UBERON:0005426!8.25e-08!4 | |ontology_enrichment_uberon=UBERON:0000488!7.66e-29!4;UBERON:0007625!1.32e-22!11;UBERON:0001778!2.47e-22!3;UBERON:0001775!2.47e-22!3;UBERON:0003075!1.37e-19!86;UBERON:0007284!1.37e-19!86;UBERON:0002203!2.59e-19!6;UBERON:0001768!2.59e-19!6;UBERON:0002346!1.39e-18!90;UBERON:0001017!9.54e-18!82;UBERON:0001801!1.16e-17!14;UBERON:0000153!3.79e-17!129;UBERON:0007811!3.79e-17!129;UBERON:0005743!8.46e-17!86;UBERON:0000033!3.81e-16!123;UBERON:0004121!2.80e-15!169;UBERON:0000073!5.94e-15!94;UBERON:0001016!5.94e-15!94;UBERON:0000924!7.75e-15!173;UBERON:0006601!7.75e-15!173;UBERON:0004733!3.68e-14!12;UBERON:0002028!3.68e-14!12;UBERON:0007277!3.68e-14!12;UBERON:0000955!9.90e-14!69;UBERON:0006238!9.90e-14!69;UBERON:0004732!4.65e-13!13;UBERON:0000019!6.98e-13!19;UBERON:0000047!6.98e-13!19;UBERON:0004088!6.98e-13!19;UBERON:0003072!6.98e-13!19;UBERON:0003071!6.98e-13!19;UBERON:0004128!6.98e-13!19;UBERON:0002680!1.45e-12!9;UBERON:0001895!1.45e-12!9;UBERON:0010092!1.45e-12!9;UBERON:0000970!3.26e-12!20;UBERON:0003056!1.31e-11!61;UBERON:0002104!1.32e-11!21;UBERON:0001456!1.32e-11!21;UBERON:0003076!2.70e-11!15;UBERON:0003057!2.70e-11!15;UBERON:0002037!3.49e-11!6;UBERON:0006215!3.49e-11!6;UBERON:0002200!1.31e-10!11;UBERON:0006876!1.31e-10!11;UBERON:0000020!1.50e-10!23;UBERON:0001049!3.91e-10!57;UBERON:0005068!3.91e-10!57;UBERON:0006241!3.91e-10!57;UBERON:0007135!3.91e-10!57;UBERON:0001032!4.34e-10!24;UBERON:0004456!4.34e-10!24;UBERON:0002616!9.66e-10!59;UBERON:0002506!2.89e-08!1;UBERON:0001769!2.89e-08!1;UBERON:0005085!2.96e-08!29;UBERON:0007190!3.83e-08!1;UBERON:0002363!4.11e-08!1;UBERON:0007647!4.11e-08!1;UBERON:0010115!4.11e-08!1;UBERON:0002581!6.68e-08!1;UBERON:0010077!8.25e-08!4;UBERON:0005389!8.25e-08!4;UBERON:0000484!8.25e-08!4;UBERON:0002546!8.25e-08!4;UBERON:0000965!8.25e-08!4;UBERON:0001803!8.25e-08!4;UBERON:0003073!8.25e-08!4;UBERON:0005426!8.25e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.96e-34;3!UBERON:0001775;5.96e-34;3!UBERON:0000488;7.14e-26;4!UBERON:0002203;9.07e-18;6!UBERON:0001768;9.07e-18;6!UBERON:0002200;9.07e-18;6!UBERON:0007625;2.37e-10;11!UBERON:0006876;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,5.96e-34,3;UBERON:0001775,5.96e-34,3;UBERON:0000488,7.14e-26,4;UBERON:0002203,9.07e-18,6;UBERON:0001768,9.07e-18,6;UBERON:0002200,9.07e-18,6;UBERON:0007625,2.37e-10,11;UBERON:0006876,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:210798655..210798664,+ | |short_description=p@chr2:210798655..210798664,+ | ||
}} | }} |
Latest revision as of 05:41, 29 July 2015
Short description: | p@chr2:210798655..210798664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:210798655..210798664, + |
Coexpression cluster: | C2686_Neural_Ciliary_Astrocyte_neuroblastoma_Lens_teratocarcinoma_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.96e-34 | 3 |
ciliated epithelial cell | 5.96e-34 | 3 |
multi-ciliated epithelial cell | 5.96e-34 | 3 |
non-pigmented ciliary epithelial cell | 5.96e-34 | 3 |
neuronal stem cell | 9.39e-14 | 8 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 5.96e-34 | 3 |
ciliary body | 5.96e-34 | 3 |
atypical epithelium | 7.14e-26 | 4 |
vasculature of eye | 9.07e-18 | 6 |
uvea | 9.07e-18 | 6 |
vasculature of head | 9.07e-18 | 6 |
pigment epithelium of eye | 2.37e-10 | 11 |
vasculature of organ | 2.37e-10 | 11 |
anterior segment of eyeball | 2.00e-08 | 14 |