FFCP PHASE1:Hg19::chr2:208104497..208104512,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000430494_5end | |association_with_transcript=-22bp_to_ENST00000430494_5end | ||
|cluster_id=chr2:208104497..208104512,+ | |||
|description=CAGE_peak_2_at_ENST00000430494_5end | |description=CAGE_peak_2_at_ENST00000430494_5end | ||
|id=chr2:208104497..208104512,+ | |id=chr2:208104497..208104512,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.53e-15!9;CL:0002570!2.21e-13!8;CL:0000144!1.99e-10!625;CL:0000548!1.54e-09!679;CL:0000004!1.54e-09!679;CL:0000255!1.54e-09!679;CL:0000055!1.84e-09!180;CL:0000012!2.16e-09!682;CL:0002371!2.31e-09!591;CL:0000594!4.36e-08!3;CL:0000197!5.30e-08!6;CL:0000098!5.30e-08!6;CL:0002167!5.30e-08!6;CL:0002621!1.06e-07!3;CL:0000057!1.46e-07!75;CL:0000003!1.55e-07!722;CL:0000135!3.20e-07!3;CL:0000386!3.20e-07!3;CL:0000388!3.20e-07!3;CL:0002334!7.30e-07!12 | |ontology_enrichment_celltype=CL:0000188!1.53e-15!9;CL:0002570!2.21e-13!8;CL:0000144!1.99e-10!625;CL:0000548!1.54e-09!679;CL:0000004!1.54e-09!679;CL:0000255!1.54e-09!679;CL:0000055!1.84e-09!180;CL:0000012!2.16e-09!682;CL:0002371!2.31e-09!591;CL:0000594!4.36e-08!3;CL:0000197!5.30e-08!6;CL:0000098!5.30e-08!6;CL:0002167!5.30e-08!6;CL:0002621!1.06e-07!3;CL:0000057!1.46e-07!75;CL:0000003!1.55e-07!722;CL:0000135!3.20e-07!3;CL:0000386!3.20e-07!3;CL:0000388!3.20e-07!3;CL:0002334!7.30e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000594;3.69e-50;3!CL:0000188;9.43e-46;9!CL:0000680;5.69e-22;7!CL:0002570;2.90e-19;8!CL:0000187;8.17e-08;55!CL:0000723;5.59e-07;61!CL:0002564;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,2.23e-50,3;CL:0000188,1.14e-45,9;CL:0002570,2.00e-19,8;CL:0000187,1.49e-07,55;CL:0000680,3.67e-07,58;CL:0000056,3.67e-07,58;CL:0000355,3.67e-07,58;CL:0002564,8.15e-07,3;CL:0000393,8.29e-07,61;CL:0000211,8.29e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001828!2.12e-12!8;UBERON:0000165!5.30e-08!28;UBERON:0000930!5.30e-08!28;UBERON:0000166!7.26e-08!21;UBERON:0001949!1.06e-07!3;UBERON:0000043!3.20e-07!3;UBERON:0001013!4.55e-07!14;UBERON:0001444!6.55e-07!48 | |ontology_enrichment_uberon=UBERON:0001828!2.12e-12!8;UBERON:0000165!5.30e-08!28;UBERON:0000930!5.30e-08!28;UBERON:0000166!7.26e-08!21;UBERON:0001949!1.06e-07!3;UBERON:0000043!3.20e-07!3;UBERON:0001013!4.55e-07!14;UBERON:0001444!6.55e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.48e-26;16!UBERON:0002036;7.48e-26;16!UBERON:0002385;2.19e-13;31!UBERON:0001015;2.19e-13;31!UBERON:0000383;2.19e-13;31!UBERON:0001013;2.72e-11;14!UBERON:0002242;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.20e-11,14;UBERON:0002242,8.15e-07,3;UBERON:0003068,8.15e-07,3;UBERON:0002328,8.15e-07,3;UBERON:0004880,8.15e-07,3 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.966304265816484,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,3.57656445851882,1.690605505112,0,0,0,0,0,0,0,0,1.95441710576241,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,1.3864375540318,1.07452572308291,0.413509717453592,5.04875150880886,1.45016693914229,1.87498580315422,0.801288320820636,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0.231051332300676,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.966304265816484,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,3.57656445851882,1.690605505112,0,0,0,0,0,0,0,0,1.95441710576241,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,1.3864375540318,1.07452572308291,0.413509717453592,5.04875150880886,1.45016693914229,1.87498580315422,0.801288320820636,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0.231051332300676,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000430494 | |short_description=p2@ENST00000430494 | ||
}} | }} |
Latest revision as of 05:28, 29 July 2015
Short description: | p2@ENST00000430494 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000430494_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000430494_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 2.23e-50 | 3 |
cell of skeletal muscle | 1.14e-45 | 9 |
mesenchymal stem cell of adipose | 2.00e-19 | 8 |
muscle cell | 1.49e-07 | 55 |
muscle precursor cell | 3.67e-07 | 58 |
myoblast | 3.67e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.67e-07 | 58 |
nucleus pulposus cell of intervertebral disc | 8.15e-07 | 3 |
electrically responsive cell | 8.29e-07 | 61 |
electrically active cell | 8.29e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.20e-11 | 14 |
nucleus pulposus | 8.15e-07 | 3 |
axial mesoderm | 8.15e-07 | 3 |
notochord | 8.15e-07 | 3 |
chordamesoderm | 8.15e-07 | 3 |