FFCP PHASE1:Hg19::chr2:204266094..204266122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:204266094..204266122,+ | |||
|coexpression_cluster_id=C161 | |coexpression_cluster_id=C161 | ||
|description=CAGE_peak_at_chr2:204266094..204266122,+ | |description=CAGE_peak_at_chr2:204266094..204266122,+ | ||
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|ontology_enrichment_celltype=CL:0000077!2.70e-21!19;CL:0000213!1.62e-08!57;CL:0000215!1.62e-08!57;CL:0000222!8.19e-07!119 | |ontology_enrichment_celltype=CL:0000077!2.70e-21!19;CL:0000213!1.62e-08!57;CL:0000215!1.62e-08!57;CL:0000222!8.19e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002097;4.32e-26;2!CL:0000077;2.96e-24;19!CL:0000174;6.76e-18;3!CL:0000150;7.48e-07;9!CL:0000163;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0002097;4.32e-26;2!CL:0000077;2.96e-24;19!CL:0000174;6.76e-18;3!CL:0000150;7.48e-07;9!CL:0000163;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002097,4.32e-26,2;CL:0000077,3.20e-24,19;CL:0000174,6.76e-18,3;CL:0000213,1.42e-08,58;CL:0000215,1.42e-08,58;CL:0000076,5.86e-08,63;CL:0000150,7.48e-07,9;CL:0000163,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.26e-11;5 | |ontology_enrichment_development_v019=UBERON:0007123;3.26e-11;5 | ||
|ontology_enrichment_disease=DOID:3112!4.09e-10!1 | |ontology_enrichment_disease=DOID:3112!4.09e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:3112;3.99e-50;1!DOID:170;1.22e-09;6 | |ontology_enrichment_disease_v019=DOID:3112;3.99e-50;1!DOID:170;1.22e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,2.42e-50,1;DOID:170,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002369!3.57e-12!3;UBERON:0001235!3.57e-12!3;UBERON:0006858!3.57e-12!3;UBERON:0001896!5.28e-12!3;UBERON:0005290!5.28e-12!3;UBERON:0010096!5.28e-12!3;UBERON:0006834!1.91e-09!1;UBERON:0002022!2.08e-09!1 | |ontology_enrichment_uberon=UBERON:0002369!3.57e-12!3;UBERON:0001235!3.57e-12!3;UBERON:0006858!3.57e-12!3;UBERON:0001896!5.28e-12!3;UBERON:0005290!5.28e-12!3;UBERON:0010096!5.28e-12!3;UBERON:0006834!1.91e-09!1;UBERON:0002022!2.08e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;6.76e-18;3!UBERON:0001235;6.76e-18;3!UBERON:0006858;6.76e-18;3!UBERON:0002046;3.26e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0002369;6.76e-18;3!UBERON:0001235;6.76e-18;3!UBERON:0006858;6.76e-18;3!UBERON:0002046;3.26e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.76e-18,3;UBERON:0001235,6.76e-18,3;UBERON:0006858,6.76e-18,3;UBERON:0002046,2.94e-11,5;UBERON:0004117,2.94e-11,5;UBERON:0007689,2.94e-11,5;UBERON:0007123,2.94e-11,5;UBERON:0003091,2.94e-11,5;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p@chr2:204266094..204266122,+ | |short_description=p@chr2:204266094..204266122,+ | ||
}} | }} |
Latest revision as of 05:16, 29 July 2015
Short description: | p@chr2:204266094..204266122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:204266094..204266122, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 4.32e-26 | 2 |
mesothelial cell | 3.20e-24 | 19 |
steroid hormone secreting cell | 6.76e-18 | 3 |
lining cell | 1.42e-08 | 58 |
barrier cell | 1.42e-08 | 58 |
squamous epithelial cell | 5.86e-08 | 63 |
glandular epithelial cell | 7.48e-07 | 9 |
endocrine cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 6.76e-18 | 3 |
adrenal cortex | 6.76e-18 | 3 |
adrenal/interrenal gland | 6.76e-18 | 3 |
thyroid gland | 2.94e-11 | 5 |
pharyngeal pouch | 2.94e-11 | 5 |
thyroid diverticulum | 2.94e-11 | 5 |
pharyngeal pouch 2 | 2.94e-11 | 5 |
thyroid primordium | 2.94e-11 | 5 |
endocrine gland | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.42e-50 | 1 |
endocrine gland cancer | 1.22e-09 | 6 |