FFCP PHASE1:Hg19::chr2:20404043..20404055,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:20404043..20404055,- | |||
|coexpression_cluster_id=C572 | |||
|description=CAGE_peak_at_chr2:20404043..20404055,- | |||
|id=chr2:20404043..20404055,- | |||
|ontology_enrichment_celltype=CL:0000223!2.03e-18!59;CL:0000066!6.15e-18!254;CL:0002076!7.46e-18!43;CL:0002368!2.19e-14!13;CL:0002202!7.26e-09!9;CL:0002632!7.26e-09!9;CL:0000220!5.46e-08!246;CL:0002321!8.27e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.54e-31;14!CL:0000575;4.94e-19;2!CL:0000312;4.25e-17;5!CL:0000362;1.81e-16;9!CL:0000240;2.39e-14;6!CL:0000311;2.39e-14;6!CL:0000079;2.39e-14;6!CL:0000237;2.39e-14;6!CL:0002328;2.70e-13;3!CL:0002231;5.13e-13;3!CL:0002368;1.80e-11;13!CL:0002077;2.89e-11;34!CL:0002076;3.07e-10;42!CL:0000244;3.08e-10;4!CL:0000731;3.08e-10;4!CL:0002202;9.55e-10;9!CL:0002632;9.55e-10;9!CL:0000622;3.64e-08;5!CL:0000154;6.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.66e-31,14;CL:0000575,1.97e-19,2;CL:0000312,6.25e-17,5;CL:0000362,1.71e-16,9;CL:0000240,3.29e-14,6;CL:0000311,3.29e-14,6;CL:0000079,3.29e-14,6;CL:0000237,3.29e-14,6;CL:0000036,3.29e-14,6;CL:0000357,3.29e-14,6;CL:0000114,3.29e-14,6;CL:0002328,3.57e-13,3;CL:0002231,6.97e-13,3;CL:0002076,8.82e-13,42;CL:0002077,2.14e-12,34;CL:0000223,2.27e-11,58;CL:0002368,2.54e-11,13;CL:0000244,2.51e-10,4;CL:0000731,2.51e-10,4;CL:0002202,1.33e-09,9;CL:0002632,1.33e-09,9;CL:0000066,9.86e-09,253;CL:0000622,2.19e-08,5;CL:0000154,4.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;2.39e-14;6!CL:0000114;2.39e-14;6!UBERON:0009143;8.12e-11;1!CL:0000223;1.17e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.76e-13!169;UBERON:0000925!7.76e-13!169;UBERON:0006595!7.76e-13!169;UBERON:0005911!5.75e-10!82;UBERON:0001007!2.24e-08!155;UBERON:0001555!2.24e-08!155;UBERON:0007026!2.24e-08!155;UBERON:0000077!1.23e-07!130;UBERON:0005177!1.60e-07!107;UBERON:0001004!2.58e-07!72;UBERON:0003929!4.46e-07!54;UBERON:0004921!6.75e-07!129;UBERON:0004185!6.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.70e-13;3!UBERON:0002031;2.70e-13;3!UBERON:0005795;2.17e-10;1!UBERON:0000964;5.44e-10;4!UBERON:0010409;5.44e-10;4!UBERON:0001003;5.77e-10;15!UBERON:0007376;5.77e-10;15!UBERON:0000365;2.31e-08;5!UBERON:0002185;2.49e-08;5!UBERON:0000486;1.90e-07;12!UBERON:0005910;4.19e-07;6!UBERON:0010371;5.56e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.57e-13,3;UBERON:0002031,3.57e-13,3;UBERON:0000964,3.46e-10,4;UBERON:0010409,3.46e-10,4;UBERON:0004348,3.46e-10,4;UBERON:0005427,3.46e-10,4;UBERON:0001003,5.58e-10,15;UBERON:0007376,5.58e-10,15;UBERON:0007383,5.58e-10,15;UBERON:0003102,2.28e-09,99;UBERON:0000365,1.97e-08,5;UBERON:0002185,2.94e-08,5;UBERON:0005910,3.66e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0.164201178899891,0,0,0,0,0.919421224478927,2.71085326900425,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,1.73934767846967,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,2.63400684980701,1.1240175325762,1.20634766893957,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.581051892299796,0.120859449591622,1.00253235151642,1.65745780084613,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.13345112812495,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,0.382838137483752,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,1.22386941009813,0,1.68471475667626,3.54744122829341,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0.0979923974143777,0,0.52418000472609,0,0,0,0.0821154570532092,2.03676934625681,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0,0,0,0.5085370753095,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0.879313402068495,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0.419638523158333,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,1.7071847709395,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0.870866991587845,0,0,0.358611026963382,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr2:20404043..20404055,- | |||
}} |
Latest revision as of 05:13, 29 July 2015
Short description: | p@chr2:20404043..20404055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20404043..20404055, - |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 4.66e-31 | 14 |
corneal epithelial cell | 1.97e-19 | 2 |
keratinocyte | 6.25e-17 | 5 |
epidermal cell | 1.71e-16 | 9 |
stratified squamous epithelial cell | 3.29e-14 | 6 |
keratin accumulating cell | 3.29e-14 | 6 |
stratified epithelial cell | 3.29e-14 | 6 |
keratinizing barrier epithelial cell | 3.29e-14 | 6 |
epithelial fate stem cell | 3.29e-14 | 6 |
stratified epithelial stem cell | 3.29e-14 | 6 |
surface ectodermal cell | 3.29e-14 | 6 |
bronchial epithelial cell | 3.57e-13 | 3 |
epithelial cell of prostate | 6.97e-13 | 3 |
endo-epithelial cell | 8.82e-13 | 42 |
ecto-epithelial cell | 2.14e-12 | 34 |
endodermal cell | 2.27e-11 | 58 |
respiratory epithelial cell | 2.54e-11 | 13 |
transitional epithelial cell | 2.51e-10 | 4 |
urothelial cell | 2.51e-10 | 4 |
epithelial cell of tracheobronchial tree | 1.33e-09 | 9 |
epithelial cell of lower respiratory tract | 1.33e-09 | 9 |
epithelial cell | 9.86e-09 | 253 |
acinar cell | 2.19e-08 | 5 |
protein secreting cell | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.57e-13 | 3 |
epithelium of bronchus | 3.57e-13 | 3 |
cornea | 3.46e-10 | 4 |
eye surface | 3.46e-10 | 4 |
optic eminence | 3.46e-10 | 4 |
corneal primordium | 3.46e-10 | 4 |
skin epidermis | 5.58e-10 | 15 |
outer epithelium | 5.58e-10 | 15 |
enveloping layer of ectoderm | 5.58e-10 | 15 |
surface structure | 2.28e-09 | 99 |
urothelium | 1.97e-08 | 5 |
bronchus | 2.94e-08 | 5 |
transitional epithelium | 3.66e-07 | 6 |