FFCP PHASE1:Hg19::chr2:198353953..198353964,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:198353953..198353964,- | |||
|description=CAGE_peak_at_chr2:198353953..198353964,- | |description=CAGE_peak_at_chr2:198353953..198353964,- | ||
|id=chr2:198353953..198353964,- | |id=chr2:198353953..198353964,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.35e-09;6!CL:0000404;2.35e-09;6!CL:0000182;2.52e-08;12!CL:0000785;1.69e-07;1!CL:0000819;1.69e-07;1!CL:0002379;5.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.57e-09,6;CL:0000031,2.57e-09,6;CL:0000404,2.57e-09,6;CL:0000182,2.56e-08,12;CL:0000819,1.55e-07,1;CL:0000047,4.28e-07,8;CL:0002379,4.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.35e-09;6!UBERON:0004161;6.53e-09;11!UBERON:0009497;1.51e-07;13 | |||
|ontology_enrichment_disease=DOID:162!1.16e-16!235;DOID:14566!2.66e-16!239;DOID:0050687!3.77e-13!143;DOID:305!9.59e-13!106 | |ontology_enrichment_disease=DOID:162!1.16e-16!235;DOID:14566!2.66e-16!239;DOID:0050687!3.77e-13!143;DOID:305!9.59e-13!106 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.69e-07;1!DOID:8675;1.69e-07;1!DOID:3620;5.12e-07;1!DOID:3565;5.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.55e-07,1;DOID:8675,1.55e-07,1;DOID:3620,4.57e-07,1;DOID:3565,4.57e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.75e-11;19!UBERON:0006925;8.75e-11;19!UBERON:0002423;4.74e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.00e-10,19;UBERON:0006925,1.00e-10,19;UBERON:0008836,1.00e-10,19;UBERON:0008835,3.51e-09,22;UBERON:0003894,3.51e-09,22;UBERON:0009854,9.34e-09,23;UBERON:0007499,5.24e-08,25;UBERON:0009497,5.24e-08,25;UBERON:0000015,5.24e-08,25;UBERON:0002423,5.24e-08,25;UBERON:0006235,5.24e-08,25;UBERON:0004161,5.24e-08,25;UBERON:0009856,1.12e-07,26 | |||
|phase1_expression=0.54503513781167,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0.37129905888014,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0.958120975510189,0.376627918784408,1.14620108621927,0.985207073399349,0.472264687882075,0,0,0,0,0.30120591877825,0.369754010166788,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,2.1349799145941,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,1.52664848236894,0.647491777472526,0.561803226808994,0,0.61417158655884,0,0,0,0,0,0,0.875829639103749,0,0.438977620880838,0.30648779579902,0.300476117813194,0.453728732640084,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,1.58565817968474,0,0.464775771478074,0.829288440122964,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0,0.591534000199219,0.674338760312407,0.241011029883482,0.992645754591546,0.217879444092406,0.474541238222193,0.539325232640658,1.56977172100277,1.92373578473195,0,0,0,1.47008711385542,0,0,3.54473944008842,0.441463099414651,0.245976877086227,0.343135620597051,0,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0.22001485746285,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.672510863961164,0,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,1.24900292158013,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.925258162815933,0.532685175939381,0.164254312027618,0,0.581051892299796,1.0877350463246,0.200506470303285,0.460404944679482,0.229628896329213,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0.54941678891006,0,0,0.650060246036521,0,0.096670718292122,0.770243085573222,0.921022048356777,0.413509717453592,0.214840489736547,1.0151168573996,0.681813019328807,0,0.330569830721956,0.576570202095319,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,1.09814811894422,0.353437207037059,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.961416640147258,0,0.245040215981032,0.929015875628594,0,0.213425530045242,0.318852545457645,1.39705560002972,0,0.211673582723883,0,0.561594356226918,0.456469358066384,0.47003968731907,0,0.50787533340481,0,0.403599414382095,0,0,0,0.223676107892416,0.166849141711909,0.781552381608161,0.556812347790485,0,0,0,0,0.561421621224659,0,0.36408156524854,0.334330152832435,0.284136146806413,0,0,0,0.994147647766298,0,0.222617410045812,0.824019371133798,0.422250816255987,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0.246169610922139,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0,1.41832609060762,0,0.583209226766509,0.520874984799877,0,1.20596438625408,0,0.110579259931225,0.295547618953547,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0.46112780877612,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0.332423363800313,0.225595660617181,0,0.671286347903371,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,3.64909578431332,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0.967563312890852,0.511625219603299,0.985385484638511,0,0.176512253383001,0.677942222341597,0.274083849293502,0.794858446811959,0.126621591911757,0.195551382734803,0,0,0.599428828746391,0.576361668616424,0.229073192331831,1.20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| ||
|short_description=p@chr2:198353953..198353964,- | |short_description=p@chr2:198353953..198353964,- | ||
}} | }} |
Latest revision as of 04:43, 29 July 2015
Short description: | p@chr2:198353953..198353964, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:198353953..198353964, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.57e-09 | 6 |
neuroblast | 2.57e-09 | 6 |
electrically signaling cell | 2.57e-09 | 6 |
hepatocyte | 2.56e-08 | 12 |
B-1 B cell | 1.55e-07 | 1 |
neuronal stem cell | 4.28e-07 | 8 |
meningothelial cell | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.00e-10 | 19 |
digestive gland | 1.00e-10 | 19 |
liver bud | 1.00e-10 | 19 |
hepatic diverticulum | 3.51e-09 | 22 |
liver primordium | 3.51e-09 | 22 |
digestive tract diverticulum | 9.34e-09 | 23 |
epithelial sac | 5.24e-08 | 25 |
epithelium of foregut-midgut junction | 5.24e-08 | 25 |
anatomical boundary | 5.24e-08 | 25 |
hepatobiliary system | 5.24e-08 | 25 |
foregut-midgut junction | 5.24e-08 | 25 |
septum transversum | 5.24e-08 | 25 |
sac | 1.12e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.55e-07 | 1 |
lymphosarcoma | 1.55e-07 | 1 |
central nervous system cancer | 4.57e-07 | 1 |
meningioma | 4.57e-07 | 1 |