FFCP PHASE1:Hg19::chr2:198318580..198318624,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK096309_5end | |||
|cluster_id=chr2:198318580..198318624,- | |||
|coexpression_cluster_id=C613 | |||
|description=CAGE_peak_1_at_AK096309_5end | |||
|id=chr2:198318580..198318624,- | |||
|ontology_enrichment_celltype=CL:0002057!3.43e-23!42;CL:0000860!3.42e-21!45;CL:0000048!6.49e-18!430;CL:0000738!1.51e-17!140;CL:0000723!1.26e-16!436;CL:0000034!2.23e-16!444;CL:0000766!2.72e-15!76;CL:0000134!2.86e-15!358;CL:0002320!9.89e-15!365;CL:0000003!2.93e-13!722;CL:0000557!5.81e-13!71;CL:0000219!3.69e-12!390;CL:0000144!4.22e-12!625;CL:0002087!7.81e-12!119;CL:0002031!1.09e-11!124;CL:0002009!1.95e-11!65;CL:0002371!7.85e-11!591;CL:0000037!8.18e-11!172;CL:0000566!8.18e-11!172;CL:0000839!9.06e-11!70;CL:0002194!1.41e-10!63;CL:0000576!1.41e-10!63;CL:0000040!1.41e-10!63;CL:0000559!1.41e-10!63;CL:0000988!2.78e-10!182;CL:0000012!1.02e-09!682;CL:0000548!6.52e-09!679;CL:0000004!6.52e-09!679;CL:0000255!6.52e-09!679;CL:0002032!6.55e-09!165;CL:0000837!6.55e-09!165;CL:0000063!9.15e-08!578;CL:0000763!1.73e-07!112;CL:0000049!1.73e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-18;33!CL:0002057;1.43e-18;33!CL:0000576;2.46e-12;48!CL:0000473;6.46e-11;39!CL:0000234;6.46e-11;39!CL:0000766;3.38e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.56e-25,42;CL:0002057,3.56e-25,42;CL:0000048,1.23e-19,427;CL:0000738,2.51e-19,136;CL:0000473,9.19e-19,48;CL:0000234,9.19e-19,48;CL:0000766,1.13e-18,72;CL:0000723,1.88e-18,433;CL:0000034,4.33e-18,441;CL:0000134,2.26e-16,354;CL:0000557,5.58e-16,67;CL:0002320,2.27e-15,361;CL:0002009,2.94e-14,61;CL:0000839,2.56e-13,66;CL:0002194,2.99e-13,59;CL:0000576,2.99e-13,59;CL:0000040,2.99e-13,59;CL:0000559,2.99e-13,59;CL:0002087,3.61e-13,115;CL:0002031,5.80e-13,120;CL:0000219,1.37e-12,386;CL:0000037,3.45e-12,168;CL:0000988,2.44e-11,177;CL:0002032,4.72e-10,161;CL:0000837,4.72e-10,161;CL:0000763,2.68e-09,108;CL:0000049,2.68e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.19e-14!375;UBERON:0002371!1.36e-12!80;UBERON:0001474!1.03e-11!86;UBERON:0004765!1.54e-08!101;UBERON:0001434!1.54e-08!101;UBERON:0002390!2.68e-08!102;UBERON:0003061!2.68e-08!102;UBERON:0002204!3.11e-08!167;UBERON:0002405!5.09e-08!115;UBERON:0002193!7.77e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.69e-15,76;UBERON:0002384,4.64e-15,371;UBERON:0001474,4.73e-14,82;UBERON:0002405,3.84e-11,93;UBERON:0004765,4.54e-11,90;UBERON:0002390,2.57e-10,98;UBERON:0003061,2.57e-10,98;UBERON:0002204,1.11e-09,167;UBERON:0001434,1.59e-09,100;UBERON:0002193,4.07e-09,108;UBERON:0003081,2.85e-08,203;UBERON:0000926,5.73e-07,315;UBERON:0004120,5.73e-07,315;UBERON:0006603,5.73e-07,315 | |||
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| |||
|short_description=p1@AK096309 | |||
}} |
Latest revision as of 04:42, 29 July 2015
Short description: | p1@AK096309 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK096309_5end |
Coexpression cluster: | C613_CD4_CD19_CD8_Natural_CD14_immature_Peripheral |
Association with transcript: | 0bp_to_AK096309_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.56e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-25 | 42 |
multi fate stem cell | 1.23e-19 | 427 |
leukocyte | 2.51e-19 | 136 |
defensive cell | 9.19e-19 | 48 |
phagocyte | 9.19e-19 | 48 |
myeloid leukocyte | 1.13e-18 | 72 |
somatic stem cell | 1.88e-18 | 433 |
stem cell | 4.33e-18 | 441 |
mesenchymal cell | 2.26e-16 | 354 |
granulocyte monocyte progenitor cell | 5.58e-16 | 67 |
connective tissue cell | 2.27e-15 | 361 |
macrophage dendritic cell progenitor | 2.94e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.56e-13 | 66 |
monopoietic cell | 2.99e-13 | 59 |
monocyte | 2.99e-13 | 59 |
monoblast | 2.99e-13 | 59 |
promonocyte | 2.99e-13 | 59 |
nongranular leukocyte | 3.61e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 5.80e-13 | 120 |
motile cell | 1.37e-12 | 386 |
hematopoietic stem cell | 3.45e-12 | 168 |
hematopoietic cell | 2.44e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.72e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.72e-10 | 161 |
myeloid cell | 2.68e-09 | 108 |
common myeloid progenitor | 2.68e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.69e-15 | 76 |
connective tissue | 4.64e-15 | 371 |
bone element | 4.73e-14 | 82 |
immune system | 3.84e-11 | 93 |
skeletal element | 4.54e-11 | 90 |
hematopoietic system | 2.57e-10 | 98 |
blood island | 2.57e-10 | 98 |
musculoskeletal system | 1.11e-09 | 167 |
skeletal system | 1.59e-09 | 100 |
hemolymphoid system | 4.07e-09 | 108 |
lateral plate mesoderm | 2.85e-08 | 203 |
mesoderm | 5.73e-07 | 315 |
mesoderm-derived structure | 5.73e-07 | 315 |
presumptive mesoderm | 5.73e-07 | 315 |