FFCP PHASE1:Hg19::chr2:194726831..194726836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:194726831..194726836,+ | |||
|coexpression_cluster_id=C1139 | |||
|description=CAGE_peak_at_chr2:194726831..194726836,+ | |description=CAGE_peak_at_chr2:194726831..194726836,+ | ||
|id=chr2:194726831..194726836,+ | |id=chr2:194726831..194726836,+ | ||
|ontology_enrichment_celltype=CL:0000515!1.78e-29!4;CL:0002594!3.65e-29!4;CL:0000680!1.76e-08!57;CL:0000056!1.76e-08!57;CL:0000355!1.76e-08!57 | |ontology_enrichment_celltype=CL:0000515!1.78e-29!4;CL:0002594!3.65e-29!4;CL:0000680!1.76e-08!57;CL:0000056!1.76e-08!57;CL:0000355!1.76e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0000515;6.24e-88;3!CL:0000056;2.40e-66;4!CL:0000680;1.49e-38;7!CL:0002321;1.04e-18;15!CL:0002594;1.03e-17;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.40e-66,4;CL:0002594,1.03e-17,4;CL:0000680,2.67e-11,58;CL:0000056,2.67e-11,58;CL:0000355,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000515;2.40e-66;4!CL:0000355;3.59e-11;58 | |||
|ontology_enrichment_disease=DOID:4231!2.37e-15!2;DOID:1907!2.37e-15!2 | |ontology_enrichment_disease=DOID:4231!2.37e-15!2;DOID:1907!2.37e-15!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!3.65e-29!4;UBERON:0001282!4.20e-29!1;UBERON:0009842!4.20e-29!1;UBERON:0003704!4.20e-29!1;UBERON:0001171!4.20e-29!1;UBERON:0001172!4.20e-29!1;UBERON:0002394!2.61e-08!4;UBERON:0003928!2.61e-08!4;UBERON:0001280!2.61e-08!4;UBERON:0004647!2.61e-08!4;UBERON:0001134!5.94e-08!61;UBERON:0002036!5.94e-08!61;UBERON:0003082!5.94e-08!61;UBERON:0002385!1.03e-07!63;UBERON:0001015!1.03e-07!63;UBERON:0000383!1.03e-07!63;UBERON:0004290!5.57e-07!70 | |ontology_enrichment_uberon=UBERON:0001310!3.65e-29!4;UBERON:0001282!4.20e-29!1;UBERON:0009842!4.20e-29!1;UBERON:0003704!4.20e-29!1;UBERON:0001171!4.20e-29!1;UBERON:0001172!4.20e-29!1;UBERON:0002394!2.61e-08!4;UBERON:0003928!2.61e-08!4;UBERON:0001280!2.61e-08!4;UBERON:0004647!2.61e-08!4;UBERON:0001134!5.94e-08!61;UBERON:0002036!5.94e-08!61;UBERON:0003082!5.94e-08!61;UBERON:0002385!1.03e-07!63;UBERON:0001015!1.03e-07!63;UBERON:0000383!1.03e-07!63;UBERON:0004290!5.57e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.03e-17;4!UBERON:0001134;1.27e-17;16!UBERON:0002036;1.27e-17;16!UBERON:0002385;2.68e-09;31!UBERON:0001015;2.68e-09;31!UBERON:0000383;2.68e-09;31!UBERON:0010260;1.21e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.03e-17,4;UBERON:0001134,1.22e-10,62;UBERON:0002036,1.22e-10,62;UBERON:0003082,1.22e-10,62;UBERON:0002385,2.44e-10,64;UBERON:0001015,2.44e-10,64;UBERON:0000383,2.44e-10,64;UBERON:0002329,2.01e-09,71;UBERON:0003059,2.01e-09,71;UBERON:0007282,2.01e-09,71;UBERON:0004290,2.01e-09,71;UBERON:0009618,2.01e-09,71;UBERON:0003077,2.63e-09,72;UBERON:0007285,2.63e-09,72;UBERON:0007524,3.42e-09,73;UBERON:0007503,1.14e-08,78;UBERON:0010260,1.21e-08,9;UBERON:0000486,3.31e-08,83 | |||
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|short_description=p@chr2:194726831..194726836,+ | |short_description=p@chr2:194726831..194726836,+ | ||
}} | }} |
Latest revision as of 04:32, 29 July 2015
Short description: | p@chr2:194726831..194726836, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:194726831..194726836, + |
Coexpression cluster: | C1139_Myoblast_mesenchymal_tongue_Preadipocyte_Astrocyte_nasal_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.40e-66 | 4 |
smooth muscle cell of the umbilical artery | 1.03e-17 | 4 |
muscle precursor cell | 2.67e-11 | 58 |
myoblast | 2.67e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.03e-17 | 4 |
skeletal muscle tissue | 1.22e-10 | 62 |
striated muscle tissue | 1.22e-10 | 62 |
myotome | 1.22e-10 | 62 |
muscle tissue | 2.44e-10 | 64 |
musculature | 2.44e-10 | 64 |
musculature of body | 2.44e-10 | 64 |
somite | 2.01e-09 | 71 |
presomitic mesoderm | 2.01e-09 | 71 |
presumptive segmental plate | 2.01e-09 | 71 |
dermomyotome | 2.01e-09 | 71 |
trunk paraxial mesoderm | 2.01e-09 | 71 |
paraxial mesoderm | 2.63e-09 | 72 |
presumptive paraxial mesoderm | 2.63e-09 | 72 |
dense mesenchyme tissue | 3.42e-09 | 73 |
epithelial vesicle | 1.14e-08 | 78 |
umbilical blood vessel | 1.21e-08 | 9 |
multilaminar epithelium | 3.31e-08 | 83 |