FFCP PHASE1:Hg19::chr2:189907904..189907929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189907904..189907929,- | |||
|description=CAGE_peak_at_chr2:189907904..189907929,- | |description=CAGE_peak_at_chr2:189907904..189907929,- | ||
|id=chr2:189907904..189907929,- | |id=chr2:189907904..189907929,- | ||
|ontology_enrichment_celltype=CL:0000055!2.20e-19!180;CL:0000057!2.17e-13!75;CL:0000048!1.32e-07!430;CL:0000723!2.32e-07!436;CL:0000680!3.13e-07!57;CL:0000056!3.13e-07!57;CL:0000355!3.13e-07!57;CL:0000187!8.38e-07!54;CL:0000183!8.40e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.20e-19!180;CL:0000057!2.17e-13!75;CL:0000048!1.32e-07!430;CL:0000723!2.32e-07!436;CL:0000680!3.13e-07!57;CL:0000056!3.13e-07!57;CL:0000355!3.13e-07!57;CL:0000187!8.38e-07!54;CL:0000183!8.40e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.04e-09;3!CL:0000135;1.88e-09;3!CL:0002580;1.88e-09;3!CL:0000388;1.88e-09;3!CL:0000136;2.51e-08;13!CL:0002616;4.88e-08;1!CL:0000222;1.63e-07;1!CL:0002591;1.63e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.04e-09,3;CL:0000057,1.59e-09,76;CL:0000135,1.89e-09,3;CL:0000388,1.89e-09,3;CL:0002580,2.05e-09,3;CL:0002616,4.89e-08,1;CL:0002591,2.47e-07,1;CL:0000136,3.19e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;1.63e-07;1!DOID:3571;1.63e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.28e-08,1;DOID:3571,1.39e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.21e-10;6!UBERON:0002358;3.21e-10;6!UBERON:0003684;3.21e-10;6!UBERON:0001178;3.21e-10;6!UBERON:0007846;1.88e-09;3!UBERON:0000043;1.88e-09;3!UBERON:0007845;1.88e-09;3!UBERON:0007029;1.63e-07;1!UBERON:0004457;5.87e-07;9!UBERON:0000042;5.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.07e-10,6;UBERON:0002358,4.07e-10,6;UBERON:0003684,4.07e-10,6;UBERON:0001178,4.07e-10,6;UBERON:0007846,1.89e-09,3;UBERON:0000043,1.89e-09,3;UBERON:0007845,1.89e-09,3;UBERON:0007029,1.30e-07,1 | |||
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| ||
|short_description=p@chr2:189907904..189907929,- | |short_description=p@chr2:189907904..189907929,- | ||
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Latest revision as of 04:17, 29 July 2015
Short description: | p@chr2:189907904..189907929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189907904..189907929, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.04e-09 | 3 |
fibroblast | 1.59e-09 | 76 |
fibrocyte | 1.89e-09 | 3 |
tendon cell | 1.89e-09 | 3 |
preadipocyte of the breast | 2.05e-09 | 3 |
perirenal adipocyte cell | 4.89e-08 | 1 |
smooth muscle cell of the pulmonary artery | 2.47e-07 | 1 |
fat cell | 3.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.07e-10 | 6 |
peritoneum | 4.07e-10 | 6 |
abdominal cavity | 4.07e-10 | 6 |
visceral peritoneum | 4.07e-10 | 6 |
dense regular connective tissue | 1.89e-09 | 3 |
tendon | 1.89e-09 | 3 |
regular connective tissue | 1.89e-09 | 3 |
surface | 1.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.28e-08 | 1 |
liver cancer | 1.39e-07 | 1 |