FFCP PHASE1:Hg19::chr2:189867024..189867049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:189867024..189867049,+ | |||
|coexpression_cluster_id=C292 | |||
|description=CAGE_peak_at_chr2:189867024..189867049,+ | |||
|id=chr2:189867024..189867049,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.89e-16!180;CL:0000057!6.57e-13!75;CL:0000048!2.78e-09!430;CL:0000723!1.21e-08!436;CL:0002494!3.65e-08!16;CL:0000187!4.22e-08!54;CL:0000183!4.73e-08!59;CL:0000034!7.79e-08!444;CL:0002334!8.20e-08!12;CL:0000680!9.87e-08!57;CL:0000056!9.87e-08!57;CL:0000355!9.87e-08!57;CL:0002570!3.64e-07!8;CL:0000136!4.16e-07!15;CL:0000499!4.25e-07!27;CL:0000393!5.03e-07!60;CL:0000211!5.03e-07!60;CL:0000327!6.95e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.34e-10;13!CL:0000134;1.31e-09;55!CL:0000499;1.44e-08;28!CL:0002570;1.63e-08;8!CL:0000048;1.72e-08;58!CL:0000135;4.85e-08;3!CL:0000388;4.85e-08;3!CL:0000723;5.20e-08;61!CL:0002615;5.88e-08;3!CL:0002504;2.99e-07;3!CL:1000279;2.99e-07;3!CL:1000280;2.99e-07;3!CL:0000632;3.55e-07;3!CL:0002580;7.53e-07;3!CL:0000349;8.03e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.02e-13,15;CL:0002570,1.22e-08,8;CL:0000499,1.65e-08,28;CL:0000135,5.49e-08,3;CL:0000388,5.49e-08,3;CL:0002615,6.73e-08,3;CL:0000632,2.07e-07,3;CL:0002504,4.11e-07,3;CL:1000279,4.11e-07,3;CL:1000280,4.11e-07,3;CL:0002580,5.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.04e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.45e-11!14;UBERON:0004290!5.48e-09!70;UBERON:0001134!7.51e-09!61;UBERON:0002036!7.51e-09!61;UBERON:0003082!7.51e-09!61;UBERON:0000914!1.56e-08!83;UBERON:0002329!1.56e-08!83;UBERON:0003077!1.56e-08!83;UBERON:0003059!1.56e-08!83;UBERON:0007282!1.56e-08!83;UBERON:0009618!1.56e-08!83;UBERON:0007285!1.56e-08!83;UBERON:0002385!3.05e-08!63;UBERON:0001015!3.05e-08!63;UBERON:0000383!3.05e-08!63;UBERON:0000948!1.09e-07!24;UBERON:0005498!1.09e-07!24;UBERON:0004140!1.09e-07!24;UBERON:0009881!1.09e-07!24;UBERON:0004141!1.09e-07!24;UBERON:0003084!1.09e-07!24;UBERON:0007005!1.09e-07!24;UBERON:0004139!1.09e-07!24;UBERON:0004291!1.09e-07!24;UBERON:0000486!3.83e-07!82;UBERON:0002384!7.34e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.66e-13;14!UBERON:0007846;4.85e-08;3!UBERON:0000043;4.85e-08;3!UBERON:0007845;4.85e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.19e-13,14;UBERON:0007846,5.49e-08,3;UBERON:0000043,5.49e-08,3;UBERON:0007845,5.49e-08,3 | |||
|phase1_expression=1.45342703416445,5.99481466894753,2.11431606143957,5.00366491765652,11.1740273606822,6.97870819280295,2.53299878168311,1.26343974685366,0.783556884599516,0,0,0.655324116390517,1.31883489114227,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,0.579386075843295,3.1811437882044,6.8128881842369,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.25326102332916,1.45650098894541,2.86836620748814,0,0.560677600142307,0,1.2333377420858,0.622422070799533,0.808264032418128,0.980771418680752,0.756787138224657,1.72852777344,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0.741800787835671,0,1.43723628363248,0,0,0,0,0.30648779579902,0.751190294532984,0.907457465280168,0,0.640672166455702,0.847727604638247,0.900273288253207,0.412210116953756,1.03056216018252,0,0.506328996723799,0.0974370051611986,0,0.644349290496095,0.646584227275248,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,1.6462960453256,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,1.03417372606222,3.57656445851882,1.690605505112,0,1.04007436911366,0,0,0,2.7165818795048,3.25572963234866,0.823240336780769,0.325736184293735,2.84313558994037,0,1.50719688529793,0,0.599837947092342,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,2.50085260529839,0.271265023699736,3.53550464602372,1.24900292158013,0.788512075169673,0.35142424497814,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0,0.783204629850962,1.02943027143257,0,0,0,0,1.66435439510497,1.81434175997808,1.98486246255021,1.2276957863045,3.64858122762996,0.896974044789907,0,2.41280881715411,1.48418066444991,0.154209693802656,0.710246901252508,0.492762936082855,1.55776328755086,0.464841513839837,0,0,0,1.14814448164607,1.27463817604702,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,1.6068392984416,0.290012154876366,0.308097234229289,0.307007349452259,0.413509717453592,0.751941714077915,2.0302337147992,0.511359764496605,1.4245125703478,0,0,0,0,0,1.5740617341532,0,0.308033580176089,0,0,0,0.429374660225974,0.372158369359667,0,1.14378116354295,0,1.28381696410176,0.318203247925937,0.78494864019923,1.2591072030832,4.94166653524899,2.00281083987667,0.404364963146632,0,0.421258456238981,0,1.21856744815642,0,0,2.12108147930569,0,1.10273068709225,0,0,0,1.31178950409327,0.405820753925408,0,0.281695602532241,0.286822704408103,0.687743287091848,0.35667105148125,0,0.211107635297664,1.31717957183961,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,1.48482340416319,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,7.2231988256891,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0.19351266257817,0.0730893170861856,0,0.0969890164884194,0,1.58186518546373,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0.859530882839914,0,2.23425921017803,0.458320848023367,0,0,0,0,0.201550417460179,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,3.74853647927928,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79105763464249,0.467426619694449,1.10961172300523,0.378806010550178,1.0062716070103,4.44905610798268,0.457680136793847,2.57092570397506,1.39893480524502,0.591420599958536,0.318593534327405,0.449803112163605,0.310525913752519,0.414706207840855,0.797525143673985,3.65221543268214,3.45592500693602,3.80805212168795,1.62748293281865,0.545545977607678,0.859284456339908,0,1.59238355479446,0,1.03018711554838,1.6837474438296,0,0.192619830407303,0,0,0.453411851024545,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,1.41070377476274,5.5124185923576,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0.596748666348824,0,0,0,0,0.163771917510097,0,0,0,0,0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| |||
|short_description=p@chr2:189867024..189867049,+ | |||
}} |
Latest revision as of 04:15, 29 July 2015
Short description: | p@chr2:189867024..189867049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189867024..189867049, + |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.02e-13 | 15 |
mesenchymal stem cell of adipose | 1.22e-08 | 8 |
stromal cell | 1.65e-08 | 28 |
fibrocyte | 5.49e-08 | 3 |
tendon cell | 5.49e-08 | 3 |
adipocyte of omentum tissue | 6.73e-08 | 3 |
hepatic stellate cell | 2.07e-07 | 3 |
enteric smooth muscle cell | 4.11e-07 | 3 |
smooth muscle cell of large intestine | 4.11e-07 | 3 |
smooth muscle cell of colon | 4.11e-07 | 3 |
preadipocyte of the breast | 5.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 6.19e-13 | 14 |
dense regular connective tissue | 5.49e-08 | 3 |
tendon | 5.49e-08 | 3 |
regular connective tissue | 5.49e-08 | 3 |