FFCP PHASE1:Hg19::chr2:183731087..183731115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:183731087..183731115,+ | |||
|coexpression_cluster_id=C1266 | |||
|description=CAGE_peak_at_chr2:183731087..183731115,+ | |description=CAGE_peak_at_chr2:183731087..183731115,+ | ||
|id=chr2:183731087..183731115,+ | |id=chr2:183731087..183731115,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.65e-12;2!UBERON:0003056;8.96e-09;3 | |||
|ontology_enrichment_disease=DOID:171!1.34e-07!10 | |ontology_enrichment_disease=DOID:171!1.34e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;9.23e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.01e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.27e-25!115;UBERON:0002346!5.61e-13!90;UBERON:0000073!2.90e-10!94;UBERON:0001016!2.90e-10!94;UBERON:0005743!5.30e-10!86;UBERON:0003075!1.62e-09!86;UBERON:0007284!1.62e-09!86;UBERON:0001049!6.15e-09!57;UBERON:0005068!6.15e-09!57;UBERON:0006241!6.15e-09!57;UBERON:0007135!6.15e-09!57;UBERON:0001017!1.14e-08!82;UBERON:0000153!1.64e-08!129;UBERON:0007811!1.64e-08!129;UBERON:0000955!4.76e-08!69;UBERON:0006238!4.76e-08!69;UBERON:0000924!5.05e-08!173;UBERON:0006601!5.05e-08!173;UBERON:0003076!5.58e-08!15;UBERON:0003057!5.58e-08!15;UBERON:0004733!7.62e-08!12;UBERON:0002028!7.62e-08!12;UBERON:0007277!7.62e-08!12;UBERON:0000033!8.81e-08!123;UBERON:0002616!2.03e-07!59;UBERON:0004732!3.71e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.18e-23;4!UBERON:0000923;7.18e-23;4!UBERON:0010316;7.18e-23;4!UBERON:0005291;7.18e-23;4!UBERON:0002050;1.62e-18;5!UBERON:0005423;1.62e-18;5!UBERON:0003127;2.19e-12;2!UBERON:0000020;2.45e-09;23!UBERON:0001032;5.65e-09;24!UBERON:0004456;5.65e-09;24!UBERON:0001723;1.35e-08;3!UBERON:0006915;1.35e-08;3!UBERON:0007616;1.35e-08;3!UBERON:0002217;1.35e-08;3!UBERON:0002018;1.35e-08;3!UBERON:0001033;1.35e-08;3!UBERON:0000922;3.98e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.07e-12,2;UBERON:0000020,5.43e-09,24;UBERON:0001032,5.43e-09,24;UBERON:0004456,5.43e-09,24;UBERON:0001723,1.21e-08,3;UBERON:0001033,1.21e-08,3;UBERON:0010056,1.21e-08,3;UBERON:0006915,1.40e-08,3;UBERON:0007616,1.40e-08,3;UBERON:0002217,1.40e-08,3;UBERON:0002018,1.40e-08,3 | |||
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| ||
|short_description=p@chr2:183731087..183731115,+ | |short_description=p@chr2:183731087..183731115,+ | ||
}} | }} |
Latest revision as of 04:03, 29 July 2015
Short description: | p@chr2:183731087..183731115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:183731087..183731115, + |
Coexpression cluster: | C1266_aorta_retina_eye_neuroectodermal_tongue_trachea_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.07e-12 | 2 |
sense organ | 5.43e-09 | 24 |
sensory system | 5.43e-09 | 24 |
entire sense organ system | 5.43e-09 | 24 |
tongue | 1.21e-08 | 3 |
gustatory system | 1.21e-08 | 3 |
future tongue | 1.21e-08 | 3 |
stratified squamous epithelium | 1.40e-08 | 3 |
layer of synovial tissue | 1.40e-08 | 3 |
synovial joint | 1.40e-08 | 3 |
synovial membrane of synovial joint | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.01e-09 | 10 |