FFCP PHASE1:Hg19::chr2:182174024..182174027,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:182174024..182174027,- | |||
|coexpression_cluster_id=C1886 | |coexpression_cluster_id=C1886 | ||
|description=CAGE_peak_at_chr2:182174024..182174027,- | |description=CAGE_peak_at_chr2:182174024..182174027,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!4.29e-68!42;CL:0000738!5.69e-66!140;CL:0000860!9.56e-63!45;CL:0000037!2.33e-61!172;CL:0000566!2.33e-61!172;CL:0002087!2.89e-59!119;CL:0002032!4.58e-57!165;CL:0000837!4.58e-57!165;CL:0000988!6.75e-57!182;CL:0002031!4.52e-56!124;CL:0000766!2.76e-54!76;CL:0000839!2.58e-46!70;CL:0000557!1.73e-45!71;CL:0002194!2.85e-45!63;CL:0000576!2.85e-45!63;CL:0000040!2.85e-45!63;CL:0000559!2.85e-45!63;CL:0002009!1.59e-43!65;CL:0000763!4.41e-43!112;CL:0000049!4.41e-43!112;CL:0000134!3.84e-19!358;CL:0002320!2.13e-18!365;CL:0000945!3.23e-17!24;CL:0000826!3.23e-17!24;CL:0002393!3.48e-16!9;CL:0002397!3.48e-16!9;CL:0000219!8.84e-16!390;CL:0000236!2.93e-15!14;CL:0000048!1.14e-12!430;CL:0000838!1.78e-12!52;CL:0000723!3.12e-12!436;CL:0000542!3.88e-12!53;CL:0000051!3.88e-12!53;CL:0000034!1.15e-11!444;CL:0000875!2.14e-08!3;CL:0002396!2.14e-08!3;CL:0000767!6.21e-08!3;CL:0000094!3.71e-07!8 | |ontology_enrichment_celltype=CL:0002057!4.29e-68!42;CL:0000738!5.69e-66!140;CL:0000860!9.56e-63!45;CL:0000037!2.33e-61!172;CL:0000566!2.33e-61!172;CL:0002087!2.89e-59!119;CL:0002032!4.58e-57!165;CL:0000837!4.58e-57!165;CL:0000988!6.75e-57!182;CL:0002031!4.52e-56!124;CL:0000766!2.76e-54!76;CL:0000839!2.58e-46!70;CL:0000557!1.73e-45!71;CL:0002194!2.85e-45!63;CL:0000576!2.85e-45!63;CL:0000040!2.85e-45!63;CL:0000559!2.85e-45!63;CL:0002009!1.59e-43!65;CL:0000763!4.41e-43!112;CL:0000049!4.41e-43!112;CL:0000134!3.84e-19!358;CL:0002320!2.13e-18!365;CL:0000945!3.23e-17!24;CL:0000826!3.23e-17!24;CL:0002393!3.48e-16!9;CL:0002397!3.48e-16!9;CL:0000219!8.84e-16!390;CL:0000236!2.93e-15!14;CL:0000048!1.14e-12!430;CL:0000838!1.78e-12!52;CL:0000723!3.12e-12!436;CL:0000542!3.88e-12!53;CL:0000051!3.88e-12!53;CL:0000034!1.15e-11!444;CL:0000875!2.14e-08!3;CL:0002396!2.14e-08!3;CL:0000767!6.21e-08!3;CL:0000094!3.71e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.73e-30;13!CL:0000576;2.95e-25;48!CL:0000860;4.76e-22;33!CL:0002057;4.76e-22;33!CL:0000875;1.70e-20;3!CL:0002396;1.70e-20;3!CL:0000473;3.34e-17;39!CL:0000234;3.34e-17;39!CL:0000766;1.91e-16;69!CL:0000945;8.17e-16;24!CL:0002393;1.91e-10;6!CL:0002397;1.91e-10;6!CL:0000763;1.25e-09;100!CL:0000767;1.89e-09;3!CL:0002087;5.38e-09;104!CL:0000738;2.21e-08;136 | |ontology_enrichment_celltype_v019=CL:0000236;3.73e-30;13!CL:0000576;2.95e-25;48!CL:0000860;4.76e-22;33!CL:0002057;4.76e-22;33!CL:0000875;1.70e-20;3!CL:0002396;1.70e-20;3!CL:0000473;3.34e-17;39!CL:0000234;3.34e-17;39!CL:0000766;1.91e-16;69!CL:0000945;8.17e-16;24!CL:0002393;1.91e-10;6!CL:0002397;1.91e-10;6!CL:0000763;1.25e-09;100!CL:0000767;1.89e-09;3!CL:0002087;5.38e-09;104!CL:0000738;2.21e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.45e-44,42;CL:0002057,1.45e-44,42;CL:0000473,1.55e-38,48;CL:0000234,1.55e-38,48;CL:0002087,1.03e-31,115;CL:0000738,6.12e-31,136;CL:0000766,2.75e-30,72;CL:0002031,3.35e-30,120;CL:0002194,4.27e-30,59;CL:0000576,4.27e-30,59;CL:0000040,4.27e-30,59;CL:0000559,4.27e-30,59;CL:0002009,5.25e-29,61;CL:0000236,6.99e-28,14;CL:0002032,1.60e-27,161;CL:0000837,1.60e-27,161;CL:0000839,1.44e-26,66;CL:0000037,3.62e-26,168;CL:0000557,4.02e-26,67;CL:0002393,7.38e-26,9;CL:0002397,7.38e-26,9;CL:0000988,1.40e-24,177;CL:0000763,4.06e-21,108;CL:0000049,4.06e-21,108;CL:0000875,2.00e-20,3;CL:0002396,2.00e-20,3;CL:0000945,8.61e-16,24;CL:0000826,8.61e-16,24;CL:0000134,1.21e-09,354;CL:0000767,1.59e-09,3;CL:0002320,2.38e-09,361;CL:0000219,2.57e-08,386;CL:0000048,4.75e-07,427;CL:0000723,7.10e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.93e-33;42!CL:0000049;2.00e-09;108 | |ontology_enrichment_development_v019=CL:0002057;9.93e-33;42!CL:0000049;2.00e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.22e-55!102;UBERON:0003061!8.22e-55!102;UBERON:0002193!2.21e-50!112;UBERON:0002371!2.00e-43!80;UBERON:0001474!1.70e-39!86;UBERON:0002405!5.07e-32!115;UBERON:0004765!1.02e-31!101;UBERON:0001434!1.02e-31!101;UBERON:0003081!1.62e-18!216;UBERON:0002384!2.21e-17!375;UBERON:0002204!2.76e-14!167;UBERON:0000178!2.87e-10!15;UBERON:0000179!2.87e-10!15;UBERON:0000463!2.87e-10!15 | |ontology_enrichment_uberon=UBERON:0002390!8.22e-55!102;UBERON:0003061!8.22e-55!102;UBERON:0002193!2.21e-50!112;UBERON:0002371!2.00e-43!80;UBERON:0001474!1.70e-39!86;UBERON:0002405!5.07e-32!115;UBERON:0004765!1.02e-31!101;UBERON:0001434!1.02e-31!101;UBERON:0003081!1.62e-18!216;UBERON:0002384!2.21e-17!375;UBERON:0002204!2.76e-14!167;UBERON:0000178!2.87e-10!15;UBERON:0000179!2.87e-10!15;UBERON:0000463!2.87e-10!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-23,98;UBERON:0003061,1.36e-23,98;UBERON:0002371,1.23e-22,76;UBERON:0002193,4.90e-21,108;UBERON:0001474,9.83e-21,82;UBERON:0004765,1.38e-18,90;UBERON:0002405,7.09e-18,93;UBERON:0001434,2.21e-16,100;UBERON:0003081,2.93e-09,203;UBERON:0002384,5.99e-09,371;UBERON:0002204,2.14e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,5.11373559903575,0.767658796194425,1.54816123316076,0,0,0,0,0,0.880801318004542,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0.755751887377619,1.4555043671269,0.464858073811369,0.411167888021826,0.929119112685311,0.575384784644301,1.0246428261164,2.36482229888585,0.689491361473237,1.93645405075148,2.70852973188684,0.752969358170419,0.272906150057846,0.674170453335254,0.612167784741805,0,0.639337125799041,1.31940520074686,1.19678194572979,1.27867425159808,0,0,0.622822248995575,2.76373531782418,1.5644487552606,2.38907729175628,0.605399502633369,0.736555271975129,1.26584954976354,3.80259515361495,4.889898899196,4.40283155567589,0.673971786878971,0.300353785683013,0.32145117339416,8.83539505597871,4.17725022118089,3.65328307529268,0,2.18455444504853,2.66852776159066,6.40095333849761,4.40435585739614,0.574752439954483,1.32208974556972,3.81621501814146,2.27685187643779,0.587237189370939,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,0,0.714695326373367,2.87953591160336,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,2.19537308576098,0,0,0,0,0,0.156679895773023,0,0,0.481764225311099,0.80719882876419,0,0,0,0,0.166849141711909,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,5.11373559903575,0.767658796194425,1.54816123316076,0,0,0,0,0,0.880801318004542,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0.755751887377619,1.4555043671269,0.464858073811369,0.411167888021826,0.929119112685311,0.575384784644301,1.0246428261164,2.36482229888585,0.689491361473237,1.93645405075148,2.70852973188684,0.752969358170419,0.272906150057846,0.674170453335254,0.612167784741805,0,0.639337125799041,1.31940520074686,1.19678194572979,1.27867425159808,0,0,0.622822248995575,2.76373531782418,1.5644487552606,2.38907729175628,0.605399502633369,0.736555271975129,1.26584954976354,3.80259515361495,4.889898899196,4.40283155567589,0.673971786878971,0.300353785683013,0.32145117339416,8.83539505597871,4.17725022118089,3.65328307529268,0,2.18455444504853,2.66852776159066,6.40095333849761,4.40435585739614,0.574752439954483,1.32208974556972,3.81621501814146,2.27685187643779,0.587237189370939,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,0,0.714695326373367,2.87953591160336,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,2.19537308576098,0,0,0,0,0,0.156679895773023,0,0,0.481764225311099,0.80719882876419,0,0,0,0,0.166849141711909,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:182174024..182174027,- | |short_description=p@chr2:182174024..182174027,- | ||
}} | }} |
Latest revision as of 03:57, 29 July 2015
Short description: | p@chr2:182174024..182174027, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:182174024..182174027, - |
Coexpression cluster: | C1886_CD14CD16_CD14_CD19_Basophils_CD133_renal_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-23 | 98 |
blood island | 1.36e-23 | 98 |
bone marrow | 1.23e-22 | 76 |
hemolymphoid system | 4.90e-21 | 108 |
bone element | 9.83e-21 | 82 |
skeletal element | 1.38e-18 | 90 |
immune system | 7.09e-18 | 93 |
skeletal system | 2.21e-16 | 100 |
lateral plate mesoderm | 2.93e-09 | 203 |
connective tissue | 5.99e-09 | 371 |
musculoskeletal system | 2.14e-08 | 167 |