FFCP PHASE1:Hg19::chr2:176971270..176971277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:176971270..176971277,- | |||
|description=CAGE_peak_at_chr2:176971270..176971277,- | |description=CAGE_peak_at_chr2:176971270..176971277,- | ||
|id=chr2:176971270..176971277,- | |id=chr2:176971270..176971277,- | ||
|ontology_enrichment_celltype=CL:0000080!1.27e-11!6 | |ontology_enrichment_celltype=CL:0000080!1.27e-11!6 | ||
|ontology_enrichment_celltype_v019=CL:1001319;3.34e-66;1!CL:1000600;3.34e-66;1 | |ontology_enrichment_celltype_v019=CL:1001319;3.34e-66;1!CL:1000600;3.34e-66;1 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.39e-66,1;CL:1000600,2.39e-66,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |ontology_enrichment_development_v019=UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | ||
|ontology_enrichment_disease=DOID:1749!2.93e-24!14;DOID:162!1.24e-09!235;DOID:14566!2.71e-09!239;DOID:305!3.91e-09!106;DOID:0050687!2.17e-08!143 | |ontology_enrichment_disease=DOID:1749!2.93e-24!14;DOID:162!1.24e-09!235;DOID:14566!2.71e-09!239;DOID:305!3.91e-09!106;DOID:0050687!2.17e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003343!8.47e-18!4;UBERON:0004785!8.47e-18!4;UBERON:0003729!2.89e-14!5;UBERON:0000344!4.45e-09!12;UBERON:0005910!3.15e-07!6;UBERON:0000974!3.67e-07!10;UBERON:0002331!5.09e-07!10;UBERON:0000358!5.09e-07!10;UBERON:0000307!5.09e-07!10;UBERON:0000091!5.09e-07!10;UBERON:0000087!5.09e-07!10;UBERON:0007806!5.09e-07!10;UBERON:0008780!5.09e-07!10;UBERON:0005728!5.09e-07!10 | |ontology_enrichment_uberon=UBERON:0003343!8.47e-18!4;UBERON:0004785!8.47e-18!4;UBERON:0003729!2.89e-14!5;UBERON:0000344!4.45e-09!12;UBERON:0005910!3.15e-07!6;UBERON:0000974!3.67e-07!10;UBERON:0002331!5.09e-07!10;UBERON:0000358!5.09e-07!10;UBERON:0000307!5.09e-07!10;UBERON:0000091!5.09e-07!10;UBERON:0000087!5.09e-07!10;UBERON:0007806!5.09e-07!10;UBERON:0008780!5.09e-07!10;UBERON:0005728!5.09e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.34e-66;1!UBERON:0001256;3.34e-66;1!UBERON:0001259;3.34e-66;1!UBERON:0001255;5.96e-34;2!UBERON:0001556;5.96e-34;2!UBERON:0000365;1.71e-14;5!UBERON:0005910;2.59e-12;6!UBERON:0000489;3.24e-10;29!UBERON:0006554;6.52e-10;30!UBERON:0001008;6.52e-10;30!UBERON:0003350;1.41e-09;8!UBERON:0000486;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0004645;3.34e-66;1!UBERON:0001256;3.34e-66;1!UBERON:0001259;3.34e-66;1!UBERON:0001255;5.96e-34;2!UBERON:0001556;5.96e-34;2!UBERON:0000365;1.71e-14;5!UBERON:0005910;2.59e-12;6!UBERON:0000489;3.24e-10;29!UBERON:0006554;6.52e-10;30!UBERON:0001008;6.52e-10;30!UBERON:0003350;1.41e-09;8!UBERON:0000486;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.39e-66,1;UBERON:0001256,2.39e-66,1;UBERON:0001259,2.39e-66,1;UBERON:0001255,5.04e-34,2;UBERON:0001556,5.04e-34,2;UBERON:0000365,1.60e-14,5;UBERON:0005910,2.45e-12,6;UBERON:0000489,1.25e-09,31;UBERON:0003350,1.35e-09,8 | |||
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| ||
|short_description=p@chr2:176971270..176971277,- | |short_description=p@chr2:176971270..176971277,- | ||
}} | }} |
Latest revision as of 02:45, 29 July 2015
Short description: | p@chr2:176971270..176971277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:176971270..176971277, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.39e-66 | 1 |
lower urinary tract cell | 2.39e-66 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.39e-66 | 1 |
wall of urinary bladder | 2.39e-66 | 1 |
mucosa of urinary bladder | 2.39e-66 | 1 |
urinary bladder | 5.04e-34 | 2 |
lower urinary tract | 5.04e-34 | 2 |
urothelium | 1.60e-14 | 5 |
transitional epithelium | 2.45e-12 | 6 |
cavitated compound organ | 1.25e-09 | 31 |
epithelium of mucosa | 1.35e-09 | 8 |