FFCP PHASE1:Hg19::chr2:163134134..163134143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:163134134..163134143,- | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_at_chr2:163134134..163134143,- | |description=CAGE_peak_at_chr2:163134134..163134143,- | ||
|id=chr2:163134134..163134143,- | |id=chr2:163134134..163134143,- | ||
|ontology_enrichment_celltype=CL:0002057!2.82e-26!42;CL:0000860!4.28e-24!45;CL:0002194!2.94e-20!63;CL:0000576!2.94e-20!63;CL:0000040!2.94e-20!63;CL:0000559!2.94e-20!63;CL:0002009!1.99e-19!65;CL:0000839!1.47e-17!70;CL:0000766!2.91e-17!76;CL:0000557!3.22e-17!71;CL:0002087!1.93e-15!119;CL:0002031!1.80e-14!124;CL:0000738!6.55e-13!140;CL:0000763!1.77e-10!112;CL:0000049!1.77e-10!112;CL:0002032!1.82e-10!165;CL:0000837!1.82e-10!165;CL:0000037!1.09e-09!172;CL:0000566!1.09e-09!172;CL:0000988!1.08e-08!182 | |ontology_enrichment_celltype=CL:0002057!2.82e-26!42;CL:0000860!4.28e-24!45;CL:0002194!2.94e-20!63;CL:0000576!2.94e-20!63;CL:0000040!2.94e-20!63;CL:0000559!2.94e-20!63;CL:0002009!1.99e-19!65;CL:0000839!1.47e-17!70;CL:0000766!2.91e-17!76;CL:0000557!3.22e-17!71;CL:0002087!1.93e-15!119;CL:0002031!1.80e-14!124;CL:0000738!6.55e-13!140;CL:0000763!1.77e-10!112;CL:0000049!1.77e-10!112;CL:0002032!1.82e-10!165;CL:0000837!1.82e-10!165;CL:0000037!1.09e-09!172;CL:0000566!1.09e-09!172;CL:0000988!1.08e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.91e-15;2!CL:0000473;1.64e-10;39!CL:0000234;1.64e-10;39!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4!CL:0000860;1.32e-07;33!CL:0002057;1.32e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.78e-15,2;CL:0000766,4.94e-10,72;CL:0000473,6.16e-10,48;CL:0000234,6.16e-10,48;CL:0000306,1.82e-08,4;CL:0002222,1.82e-08,4;CL:0002224,1.82e-08,4;CL:0002194,4.89e-08,59;CL:0000576,4.89e-08,59;CL:0000040,4.89e-08,59;CL:0000559,4.89e-08,59;CL:0002009,8.61e-08,61;CL:0000839,3.07e-07,66;CL:0000557,3.87e-07,67;CL:0000763,8.44e-07,108;CL:0000049,8.44e-07,108;CL:0000860,8.70e-07,42;CL:0002057,8.70e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.76e-16!80;UBERON:0001474!2.27e-14!86;UBERON:0002405!5.02e-14!115;UBERON:0002390!4.66e-12!102;UBERON:0003061!4.66e-12!102;UBERON:0002193!2.30e-11!112;UBERON:0004765!3.10e-11!101;UBERON:0001434!3.10e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.82e-08,4;UBERON:0005389,1.82e-08,4;UBERON:0000484,1.82e-08,4;UBERON:0002546,1.82e-08,4;UBERON:0000965,1.82e-08,4;UBERON:0001803,1.82e-08,4;UBERON:0003073,1.82e-08,4;UBERON:0005426,1.82e-08,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,1.43846196161075,0.256160706529101,0,0.689491361473237,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.398927315243264,0.426224750532694,5.22376629531451,0.56738522469114,1.24564449799115,0.75374599577023,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,1.22368352253234,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr2:163134134..163134143,- | |short_description=p@chr2:163134134..163134143,- | ||
}} | }} |
Latest revision as of 01:59, 29 July 2015
Short description: | p@chr2:163134134..163134143, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:163134134..163134143, - |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.78e-15 | 2 |
myeloid leukocyte | 4.94e-10 | 72 |
defensive cell | 6.16e-10 | 48 |
phagocyte | 6.16e-10 | 48 |
crystallin accumulating cell | 1.82e-08 | 4 |
vertebrate lens cell | 1.82e-08 | 4 |
lens epithelial cell | 1.82e-08 | 4 |
monopoietic cell | 4.89e-08 | 59 |
monocyte | 4.89e-08 | 59 |
monoblast | 4.89e-08 | 59 |
promonocyte | 4.89e-08 | 59 |
macrophage dendritic cell progenitor | 8.61e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.07e-07 | 66 |
granulocyte monocyte progenitor cell | 3.87e-07 | 67 |
myeloid cell | 8.44e-07 | 108 |
common myeloid progenitor | 8.44e-07 | 108 |
classical monocyte | 8.70e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.70e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.82e-08 | 4 |
transparent eye structure | 1.82e-08 | 4 |
simple cuboidal epithelium | 1.82e-08 | 4 |
cranial placode | 1.82e-08 | 4 |
lens of camera-type eye | 1.82e-08 | 4 |
epithelium of lens | 1.82e-08 | 4 |
lens placode | 1.82e-08 | 4 |
lens vesicle | 1.82e-08 | 4 |