FFCP PHASE1:Hg19::chr2:159994644..159994663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:159994644..159994663,+ | |||
|coexpression_cluster_id=C2664 | |coexpression_cluster_id=C2664 | ||
|description=CAGE_peak_at_chr2:159994644..159994663,+ | |description=CAGE_peak_at_chr2:159994644..159994663,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.56e-09;19!CL:0002097;7.83e-07;2 | |ontology_enrichment_celltype_v019=CL:0000077;1.56e-09;19!CL:0002097;7.83e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.67e-09,19;CL:0002097,7.61e-07,2;CL:0001014,9.54e-07,2;CL:0001016,9.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.64e-12;1 | |ontology_enrichment_development_v019=UBERON:0004140;3.64e-12;1 | ||
|ontology_enrichment_disease=DOID:114!8.77e-07!2 | |ontology_enrichment_disease=DOID:114!8.77e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;6.12e-23;2!DOID:6193;7.03e-13;1!DOID:8552;1.18e-12;1!DOID:178;3.64e-12;1!DOID:326;3.64e-12;1!DOID:3978;3.64e-12;1!DOID:3394;3.64e-12;1!DOID:5844;3.64e-12;1!DOID:8692;5.56e-12;31!DOID:1287;5.70e-12;4!DOID:3350;4.56e-07;2!DOID:3493;5.41e-07;2!DOID:1240;5.63e-07;39 | |ontology_enrichment_disease_v019=DOID:114;6.12e-23;2!DOID:6193;7.03e-13;1!DOID:8552;1.18e-12;1!DOID:178;3.64e-12;1!DOID:326;3.64e-12;1!DOID:3978;3.64e-12;1!DOID:3394;3.64e-12;1!DOID:5844;3.64e-12;1!DOID:8692;5.56e-12;31!DOID:1287;5.70e-12;4!DOID:3350;4.56e-07;2!DOID:3493;5.41e-07;2!DOID:1240;5.63e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:114,6.84e-23,2;DOID:6193,7.03e-13,1;DOID:8692,1.04e-12,31;DOID:8552,1.11e-12,1;DOID:178,3.85e-12,1;DOID:326,3.85e-12,1;DOID:3978,3.85e-12,1;DOID:3394,3.85e-12,1;DOID:5844,3.85e-12,1;DOID:1287,6.03e-12,4;DOID:1240,5.05e-10,39;DOID:2531,1.44e-07,51;DOID:0060083,1.44e-07,51;DOID:3350,4.56e-07,2;DOID:3493,5.41e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.00e-07!27 | |ontology_enrichment_uberon=UBERON:0007100!1.00e-07!27 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58487181223807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55597265731176,0.572499546967965,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,4.59774653409171,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82013877510454,0,0,0,0,10.9666239496461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0071060781835,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,1.19807400299395,3.004582336956,0.446342914883745,1.20930250476107,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,10.9183052596621,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,2.57329909649911,0.260994291965212,0.680117776536817,0,0,0,3.39681591877069,0,0,0,2.19625172848994,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.68732060563215,0,0,0,5.79086378329934,0,0,0,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.653150243690884,0,0.5388164241167,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58487181223807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55597265731176,0.572499546967965,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,4.59774653409171,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82013877510454,0,0,0,0,10.9666239496461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0071060781835,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,1.19807400299395,3.004582336956,0.446342914883745,1.20930250476107,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,10.9183052596621,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,2.57329909649911,0.260994291965212,0.680117776536817,0,0,0,3.39681591877069,0,0,0,2.19625172848994,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.68732060563215,0,0,0,5.79086378329934,0,0,0,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.653150243690884,0,0.5388164241167,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:159994644..159994663,+ | |short_description=p@chr2:159994644..159994663,+ | ||
}} | }} |
Latest revision as of 01:45, 29 July 2015
Short description: | p@chr2:159994644..159994663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:159994644..159994663, + |
Coexpression cluster: | C2664_leukemia_signet_epithelioid_chronic_acute_small_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.67e-09 | 19 |
cortical cell of adrenal gland | 7.61e-07 | 2 |
CD1a-positive Langerhans cell | 9.54e-07 | 2 |
immature CD1a-positive Langerhans cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.84e-23 | 2 |
epithelioid sarcoma | 7.03e-13 | 1 |
myeloid leukemia | 1.04e-12 | 31 |
chronic myeloid leukemia | 1.11e-12 | 1 |
vascular disease | 3.85e-12 | 1 |
ischemia | 3.85e-12 | 1 |
extrinsic cardiomyopathy | 3.85e-12 | 1 |
myocardial ischemia | 3.85e-12 | 1 |
myocardial infarction | 3.85e-12 | 1 |
cardiovascular system disease | 6.03e-12 | 4 |
leukemia | 5.05e-10 | 39 |
hematologic cancer | 1.44e-07 | 51 |
immune system cancer | 1.44e-07 | 51 |
mesenchymal cell neoplasm | 4.56e-07 | 2 |
signet ring cell adenocarcinoma | 5.41e-07 | 2 |