FFCP PHASE1:Hg19::chr2:15475295..15475299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:15475295..15475299,- | |||
|coexpression_cluster_id=C347 | |coexpression_cluster_id=C347 | ||
|description=CAGE_peak_at_chr2:15475295..15475299,- | |description=CAGE_peak_at_chr2:15475295..15475299,- | ||
|id=chr2:15475295..15475299,- | |id=chr2:15475295..15475299,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.59e-12;6!DOID:171;6.34e-08;10!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.45e-12,6;DOID:171,6.13e-08,10;DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.71e-14;5!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0000010,1.12e-08,8 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0.144269212976445,0.142283686696828,0.478278818186467,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0.445234820091624,0,0.63337622438398,0,0,0.755798243562828,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0.254253650292766,0,8.96332770427808,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0.341826167541004,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0.75901493089674,0.317873157960757,0,0,0,0.216388639742091,0.995261931078505,0.265372693510018,0,0.296521128680622,0.494255755786011,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.442306057399416,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0,0.0882561266915003,0.451961481561065,0,0.19871461170299,0.126621591911757,0,0.240476460754601,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0,0,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0.138348634936231,0.124980407962107,0,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,2.94157053998399,0,0.157265941855896,0.109209638192014,0,0,0.495743057036009,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0,0.177404740325278,0.230467975111559,0.342976018874837,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0.471346769748006,0,0,0,0.47775168788705,0.142953088353313,2.84424501118908,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0.154348316215889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| ||
|short_description=p@chr2:15475295..15475299,- | |short_description=p@chr2:15475295..15475299,- | ||
}} | }} |
Latest revision as of 01:31, 29 July 2015
Short description: | p@chr2:15475295..15475299, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:15475295..15475299, - |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
peripheral nervous system | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.45e-12 | 6 |
neuroectodermal tumor | 6.13e-08 | 10 |
nervous system cancer | 8.38e-07 | 11 |