FFCP PHASE1:Hg19::chr2:150999864..150999872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:150999864..150999872,+ | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr2:150999864..150999872,+ | |description=CAGE_peak_at_chr2:150999864..150999872,+ | ||
|id=chr2:150999864..150999872,+ | |id=chr2:150999864..150999872,+ | ||
|ontology_enrichment_celltype=CL:0002586!7.11e-12!3;CL:0000342!2.77e-09!1;CL:0002565!2.77e-09!1;CL:0000149!3.99e-09!4;CL:1001319!5.72e-09!1;CL:1000600!5.72e-09!1 | |ontology_enrichment_celltype=CL:0002586!7.11e-12!3;CL:0000342!2.77e-09!1;CL:0002565!2.77e-09!1;CL:0000149!3.99e-09!4;CL:1001319!5.72e-09!1;CL:1000600!5.72e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.55e-98;2!UBERON:0010056;1.55e-98;2 | |||
|ontology_enrichment_disease=DOID:2394!1.63e-09!14;DOID:1749!2.53e-09!14;DOID:120!2.35e-07!27;DOID:193!7.84e-07!29 | |ontology_enrichment_disease=DOID:2394!1.63e-09!14;DOID:1749!2.53e-09!14;DOID:120!2.35e-07!27;DOID:193!7.84e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14!DOID:7;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001781!7.11e-12!3;UBERON:0001782!7.11e-12!3;UBERON:0005424!7.11e-12!3;UBERON:0007625!7.84e-12!11;UBERON:0002506!2.77e-09!1;UBERON:0001769!2.77e-09!1;UBERON:0002119!3.54e-09!4;UBERON:0004531!3.54e-09!4;UBERON:0000997!4.50e-09!1;UBERON:0005056!4.50e-09!1;UBERON:0003343!4.69e-09!4;UBERON:0004785!4.69e-09!4;UBERON:0004645!5.72e-09!1;UBERON:0001256!5.72e-09!1;UBERON:0001259!5.72e-09!1;UBERON:0000488!9.62e-09!4;UBERON:0000020!1.24e-08!23;UBERON:0001032!2.89e-08!24;UBERON:0004456!2.89e-08!24;UBERON:0000966!1.83e-07!5;UBERON:0005388!1.83e-07!5;UBERON:0001802!1.83e-07!5;UBERON:0003729!2.07e-07!5;UBERON:0000019!6.57e-07!19;UBERON:0000047!6.57e-07!19;UBERON:0004088!6.57e-07!19;UBERON:0003072!6.57e-07!19;UBERON:0003071!6.57e-07!19;UBERON:0004128!6.57e-07!19 | |ontology_enrichment_uberon=UBERON:0001781!7.11e-12!3;UBERON:0001782!7.11e-12!3;UBERON:0005424!7.11e-12!3;UBERON:0007625!7.84e-12!11;UBERON:0002506!2.77e-09!1;UBERON:0001769!2.77e-09!1;UBERON:0002119!3.54e-09!4;UBERON:0004531!3.54e-09!4;UBERON:0000997!4.50e-09!1;UBERON:0005056!4.50e-09!1;UBERON:0003343!4.69e-09!4;UBERON:0004785!4.69e-09!4;UBERON:0004645!5.72e-09!1;UBERON:0001256!5.72e-09!1;UBERON:0001259!5.72e-09!1;UBERON:0000488!9.62e-09!4;UBERON:0000020!1.24e-08!23;UBERON:0001032!2.89e-08!24;UBERON:0004456!2.89e-08!24;UBERON:0000966!1.83e-07!5;UBERON:0005388!1.83e-07!5;UBERON:0001802!1.83e-07!5;UBERON:0003729!2.07e-07!5;UBERON:0000019!6.57e-07!19;UBERON:0000047!6.57e-07!19;UBERON:0004088!6.57e-07!19;UBERON:0003072!6.57e-07!19;UBERON:0003071!6.57e-07!19;UBERON:0004128!6.57e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.39e-66;3!UBERON:0001033;2.39e-66;3!UBERON:0003343;3.10e-50;4!UBERON:0004785;3.10e-50;4!UBERON:0000974;4.27e-34;6!UBERON:0003729;1.21e-16;13!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.39e-66,3;UBERON:0001033,2.39e-66,3;UBERON:0010056,2.39e-66,3;UBERON:0003343,3.10e-50,4;UBERON:0004785,3.10e-50,4;UBERON:0000974,3.81e-21,10;UBERON:0001042,3.81e-21,10;UBERON:0009145,3.81e-21,10;UBERON:0006562,2.25e-19,11;UBERON:0003729,1.21e-16,13;UBERON:0008814,1.85e-12,18;UBERON:0001557,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p@chr2:150999864..150999872,+ | |short_description=p@chr2:150999864..150999872,+ | ||
}} | }} |
Latest revision as of 01:14, 29 July 2015
Short description: | p@chr2:150999864..150999872, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:150999864..150999872, + |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.39e-66 | 3 |
gustatory system | 2.39e-66 | 3 |
future tongue | 2.39e-66 | 3 |
mucosa of oral region | 3.10e-50 | 4 |
respiratory system mucosa | 3.10e-50 | 4 |
neck | 3.81e-21 | 10 |
chordate pharynx | 3.81e-21 | 10 |
pharyngeal region of foregut | 3.81e-21 | 10 |
pharynx | 2.25e-19 | 11 |
mouth mucosa | 1.21e-16 | 13 |
pharyngeal arch system | 1.85e-12 | 18 |
upper respiratory tract | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |