FFCP PHASE1:Hg19::chr2:140169017..140169038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:140169017..140169038,+ | |||
|description=CAGE_peak_at_chr2:140169017..140169038,+ | |description=CAGE_peak_at_chr2:140169017..140169038,+ | ||
|id=chr2:140169017..140169038,+ | |id=chr2:140169017..140169038,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.32e-08!165;CL:0000837!1.32e-08!165;CL:0000763!2.12e-08!112;CL:0000049!2.12e-08!112;CL:0000037!5.25e-08!172;CL:0000566!5.25e-08!172;CL:0000054!8.05e-08!2;CL:0000137!8.05e-08!2;CL:0000092!8.05e-08!2;CL:0000988!3.11e-07!182 | |ontology_enrichment_celltype=CL:0002032!1.32e-08!165;CL:0000837!1.32e-08!165;CL:0000763!2.12e-08!112;CL:0000049!2.12e-08!112;CL:0000037!5.25e-08!172;CL:0000566!5.25e-08!172;CL:0000054!8.05e-08!2;CL:0000137!8.05e-08!2;CL:0000092!8.05e-08!2;CL:0000988!3.11e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.85e-08;7!CL:0000586;1.85e-08;7 | |ontology_enrichment_celltype_v019=CL:0000039;1.85e-08;7!CL:0000586;1.85e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.98e-09,161;CL:0000837,4.98e-09,161;CL:0000037,1.67e-08,168;CL:0000039,1.83e-08,7;CL:0000586,1.83e-08,7;CL:0000988,6.82e-08,177;CL:0000763,2.48e-07,108;CL:0000049,2.48e-07,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!6.34e-37!51;DOID:0060083!6.34e-37!51;DOID:1240!1.51e-34!39;DOID:8692!1.17e-32!31;DOID:1036!3.58e-27!8;DOID:162!8.66e-22!235;DOID:14566!4.15e-21!239;DOID:0050686!2.77e-19!137;DOID:200!8.05e-08!2;DOID:4305!8.05e-08!2 | |ontology_enrichment_disease=DOID:2531!6.34e-37!51;DOID:0060083!6.34e-37!51;DOID:1240!1.51e-34!39;DOID:8692!1.17e-32!31;DOID:1036!3.58e-27!8;DOID:162!8.66e-22!235;DOID:14566!4.15e-21!239;DOID:0050686!2.77e-19!137;DOID:200!8.05e-08!2;DOID:4305!8.05e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.54e-26;31!DOID:1240;2.28e-23;39!DOID:1036;6.36e-20;8!DOID:2531;5.22e-17;51!DOID:0060083;5.22e-17;51!DOID:4960;4.72e-08;1!DOID:0070004;4.72e-08;1!DOID:2355;7.75e-08;1!DOID:0060085;2.17e-07;1!DOID:1799;2.17e-07;1!DOID:10165;2.17e-07;1!DOID:3165;2.17e-07;1!DOID:0060121;2.17e-07;1!DOID:2438;2.17e-07;1!DOID:4418;2.17e-07;1!DOID:1798;2.17e-07;1!DOID:5662;2.17e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;1.54e-26;31!DOID:1240;2.28e-23;39!DOID:1036;6.36e-20;8!DOID:2531;5.22e-17;51!DOID:0060083;5.22e-17;51!DOID:4960;4.72e-08;1!DOID:0070004;4.72e-08;1!DOID:2355;7.75e-08;1!DOID:0060085;2.17e-07;1!DOID:1799;2.17e-07;1!DOID:10165;2.17e-07;1!DOID:3165;2.17e-07;1!DOID:0060121;2.17e-07;1!DOID:2438;2.17e-07;1!DOID:4418;2.17e-07;1!DOID:1798;2.17e-07;1!DOID:5662;2.17e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.53e-32,51;DOID:0060083,1.53e-32,51;DOID:1240,4.34e-29,39;DOID:8692,2.28e-27,31;DOID:1036,7.17e-20,8;DOID:162,3.27e-17,235;DOID:14566,9.62e-17,239;DOID:0050686,4.83e-16,137;DOID:4960,4.57e-08,1;DOID:0070004,4.57e-08,1;DOID:2355,7.26e-08,1;DOID:0060085,1.69e-07,1;DOID:3165,1.69e-07,1;DOID:0060121,1.69e-07,1;DOID:2438,1.69e-07,1;DOID:4418,1.69e-07,1;DOID:1799,1.91e-07,1;DOID:10165,1.91e-07,1;DOID:1798,1.91e-07,1;DOID:5662,2.47e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.17e-07;1!UBERON:0007195;2.17e-07;1!UBERON:0009842;2.17e-07;1!UBERON:0003704;2.17e-07;1!UBERON:0001171;2.17e-07;1!UBERON:0001172;2.17e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001282;2.17e-07;1!UBERON:0007195;2.17e-07;1!UBERON:0009842;2.17e-07;1!UBERON:0003704;2.17e-07;1!UBERON:0001171;2.17e-07;1!UBERON:0001172;2.17e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.80e-07,1;UBERON:0009842,1.80e-07,1;UBERON:0003704,1.80e-07,1;UBERON:0001171,1.80e-07,1;UBERON:0001172,1.80e-07,1;UBERON:0007195,2.80e-07,1 | |||
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| ||
|short_description=p@chr2:140169017..140169038,+ | |short_description=p@chr2:140169017..140169038,+ | ||
}} | }} |
Latest revision as of 00:43, 29 July 2015
Short description: | p@chr2:140169017..140169038, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:140169017..140169038, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.98e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.98e-09 | 161 |
hematopoietic stem cell | 1.67e-08 | 168 |
germ line cell | 1.83e-08 | 7 |
germ cell | 1.83e-08 | 7 |
hematopoietic cell | 6.82e-08 | 177 |
myeloid cell | 2.48e-07 | 108 |
common myeloid progenitor | 2.48e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.80e-07 | 1 |
acinus | 1.80e-07 | 1 |
intrahepatic bile duct | 1.80e-07 | 1 |
portal lobule | 1.80e-07 | 1 |
hepatic acinus | 1.80e-07 | 1 |
stroma of bone marrow | 2.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.53e-32 | 51 |
immune system cancer | 1.53e-32 | 51 |
leukemia | 4.34e-29 | 39 |
myeloid leukemia | 2.28e-27 | 31 |
chronic leukemia | 7.17e-20 | 8 |
cancer | 3.27e-17 | 235 |
disease of cellular proliferation | 9.62e-17 | 239 |
organ system cancer | 4.83e-16 | 137 |
bone marrow cancer | 4.57e-08 | 1 |
myeloma | 4.57e-08 | 1 |
anemia | 7.26e-08 | 1 |
organ system benign neoplasm | 1.69e-07 | 1 |
skin benign neoplasm | 1.69e-07 | 1 |
integumentary system benign neoplasm | 1.69e-07 | 1 |
dermis tumor | 1.69e-07 | 1 |
cutaneous fibrous histiocytoma | 1.69e-07 | 1 |
islet cell tumor | 1.91e-07 | 1 |
endocrine pancreas cancer | 1.91e-07 | 1 |
pancreatic endocrine carcinoma | 1.91e-07 | 1 |
pleomorphic carcinoma | 2.47e-07 | 1 |