FFCP PHASE1:Hg19::chr2:135119540..135119551,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:135119540..135119551,+ to FFCP PHASE1:Hg19::chr2:135119540..135119551,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:135119540..135119551,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr2:135119540..135119551,+ | |||
|id=chr2:135119540..135119551,+ | |||
|ontology_enrichment_celltype=CL:0002379!9.84e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0002253;7.14e-26;2!CL:0000322;1.12e-17;3!CL:0002563;1.13e-13;4!CL:0000082;1.72e-11;19!CL:0002202;8.85e-07;9!CL:0002632;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.14e-26,2;CL:0000322,1.12e-17,3;CL:0002563,1.13e-13,4;CL:0000082,1.72e-11,19;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.91e-08;29!UBERON:0001041;1.17e-07;30 | |||
|ontology_enrichment_disease=DOID:3493!4.96e-19!2;DOID:0050619!7.40e-11!1;DOID:1357!7.40e-11!1;DOID:3620!9.84e-11!1;DOID:3565!9.84e-11!1;DOID:3111!1.08e-10!1;DOID:3603!1.08e-10!1;DOID:3093!1.90e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.42e-50;1!DOID:1357;2.42e-50;1!DOID:1325;3.65e-29;7!DOID:3904;3.65e-29;7!DOID:0050615;1.36e-28;16!DOID:3910;9.18e-26;2!DOID:3905;5.74e-23;9!DOID:1324;2.94e-14;15!DOID:5409;8.82e-14;4!DOID:3908;3.60e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.42e-50,1;DOID:1357,2.42e-50,1;DOID:1325,3.65e-29,7;DOID:3904,3.65e-29,7;DOID:0050615,1.36e-28,16;DOID:3910,9.18e-26,2;DOID:3905,5.74e-23,9;DOID:1324,2.94e-14,15;DOID:5409,8.82e-14,4;DOID:3908,3.60e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.44e-19!2;UBERON:0002757!3.44e-19!2;UBERON:0010134!3.44e-19!2;UBERON:0002784!3.44e-19!2;UBERON:0005408!3.44e-19!2;UBERON:0001899!3.44e-19!2;UBERON:0001764!7.40e-11!1;UBERON:0001825!7.40e-11!1;UBERON:0000029!1.89e-10!1;UBERON:0001052!2.62e-10!4;UBERON:0003296!4.55e-10!4;UBERON:0010133!4.55e-10!4;UBERON:0004907!2.04e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.42e-50;1!UBERON:0001825;2.42e-50;1!UBERON:0004903;9.18e-26;2!UBERON:0002173;9.18e-26;2!UBERON:0002186;9.18e-26;2!UBERON:0004821;1.12e-17;3!UBERON:0007499;1.12e-17;3!UBERON:0003215;1.12e-17;3!UBERON:0010368;1.12e-17;3!UBERON:0009911;1.12e-17;3!UBERON:0002299;1.12e-17;3!UBERON:0006524;1.12e-17;3!UBERON:0008874;1.12e-17;3!UBERON:0002169;1.12e-17;3!UBERON:0004894;1.12e-17;3!UBERON:0001052;1.13e-13;4!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0009856;1.29e-13;4!UBERON:0004802;1.72e-11;19!UBERON:0000115;1.72e-11;19!UBERON:0004907;3.26e-11;5!UBERON:0002048;4.53e-10;22!UBERON:0004807;4.53e-10;22!UBERON:0000117;4.53e-10;22!UBERON:0000171;4.53e-10;22!UBERON:0000170;4.53e-10;22!UBERON:0005911;4.17e-09;36!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0000490;1.25e-07;33!UBERON:0003350;1.69e-07;8!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.42e-50,1;UBERON:0001825,2.42e-50,1;UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004802,1.72e-11,19;UBERON:0000115,1.72e-11,19;UBERON:0004907,3.26e-11,5;UBERON:0002048,4.53e-10,22;UBERON:0000117,4.53e-10,22;UBERON:0000171,4.53e-10,22;UBERON:0000170,4.53e-10,22;UBERON:0005597,4.53e-10,22;UBERON:0000118,4.53e-10,22;UBERON:0004807,3.92e-08,28;UBERON:0003350,1.69e-07,8;UBERON:0001004,6.64e-07,74;UBERON:0005178,7.16e-07,34;UBERON:0002224,7.16e-07,34;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p@chr2:135119540..135119551,+ | |||
}} | }} |
Latest revision as of 00:30, 29 July 2015
Short description: | p@chr2:135119540..135119551, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:135119540..135119551, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.14e-26 | 2 |
pneumocyte | 1.12e-17 | 3 |
intestinal epithelial cell | 1.13e-13 | 4 |
epithelial cell of lung | 1.72e-11 | 19 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.42e-50 | 1 |
paranasal sinus | 2.42e-50 | 1 |
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
rectum | 1.13e-13 | 4 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
respiratory tract epithelium | 1.72e-11 | 19 |
lung epithelium | 1.72e-11 | 19 |
lower digestive tract | 3.26e-11 | 5 |
lung | 4.53e-10 | 22 |
respiratory tube | 4.53e-10 | 22 |
respiration organ | 4.53e-10 | 22 |
pair of lungs | 4.53e-10 | 22 |
lung primordium | 4.53e-10 | 22 |
lung bud | 4.53e-10 | 22 |
respiratory system epithelium | 3.92e-08 | 28 |
epithelium of mucosa | 1.69e-07 | 8 |
respiratory system | 6.64e-07 | 74 |
thoracic cavity element | 7.16e-07 | 34 |
thoracic cavity | 7.16e-07 | 34 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.42e-50 | 1 |
maxillary sinus cancer | 2.42e-50 | 1 |
bronchus cancer | 3.65e-29 | 7 |
bronchogenic carcinoma | 3.65e-29 | 7 |
respiratory system cancer | 1.36e-28 | 16 |
lung adenocarcinoma | 9.18e-26 | 2 |
lung carcinoma | 5.74e-23 | 9 |
lung cancer | 2.94e-14 | 15 |
lung small cell carcinoma | 8.82e-14 | 4 |
non-small cell lung carcinoma | 3.60e-11 | 5 |