FFCP PHASE1:Hg19::chr2:133013437..133013446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:133013437..133013446,- | |||
|coexpression_cluster_id=C375 | |||
|description=CAGE_peak_at_chr2:133013437..133013446,- | |description=CAGE_peak_at_chr2:133013437..133013446,- | ||
|id=chr2:133013437..133013446,- | |id=chr2:133013437..133013446,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.86e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-28!115;UBERON:0000062!1.86e-09!511;UBERON:0000468!1.91e-09!659;UBERON:0000922!5.35e-08!612;UBERON:0000467!6.49e-08!625;UBERON:0000480!8.34e-08!626;UBERON:0002050!5.44e-07!605;UBERON:0005423!5.44e-07!605;UBERON:0000923!9.26e-07!604;UBERON:0005291!9.26e-07!604;UBERON:0006598!9.26e-07!604;UBERON:0002532!9.26e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.30e-11;3!UBERON:0004054;1.30e-11;3!UBERON:0000125;7.41e-10;9!UBERON:0002308;7.41e-10;9!UBERON:0007023;1.48e-09;114!UBERON:0005904;8.10e-09;4!UBERON:0002133;1.57e-08;2!UBERON:0002148;5.37e-08;2!UBERON:0006331;5.37e-08;2!UBERON:0009662;5.37e-08;2!UBERON:0003528;1.81e-07;34!UBERON:0002020;1.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.49e-25,114;UBERON:0006947,9.06e-12,3;UBERON:0004054,9.06e-12,3;UBERON:0003528,6.28e-10,34;UBERON:0002020,6.28e-10,34;UBERON:0000125,1.21e-09,9;UBERON:0002308,1.21e-09,9;UBERON:0003075,1.27e-09,82;UBERON:0007284,1.27e-09,82;UBERON:0002346,5.39e-09,86;UBERON:0001049,5.90e-09,56;UBERON:0005068,5.90e-09,56;UBERON:0006241,5.90e-09,56;UBERON:0007135,5.90e-09,56;UBERON:0005904,6.22e-09,4;UBERON:0002133,8.49e-09,2;UBERON:0000073,3.28e-08,53;UBERON:0002616,3.28e-08,53;UBERON:0002148,8.58e-08,2;UBERON:0006331,8.58e-08,2;UBERON:0009662,8.58e-08,2;UBERON:0010371,9.42e-08,104;UBERON:0004111,1.09e-07,240;UBERON:0001016,3.01e-07,89;UBERON:0001017,3.02e-07,81;UBERON:0002791,3.99e-07,32;UBERON:0000955,8.14e-07,68;UBERON:0006238,8.14e-07,68 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0.545812300115692,0,0.306083892370903,0,1.27867425159808,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,12.1903433156981,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0.221729397462564,0,0.196468613246569,0,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0,1.13061588384802,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.74000264525148,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0.487894824518382,0.530119073285941,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,3.80265104465493,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0.144119953416961,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0.289562613335158,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0.12269149171914,0.500170521059677,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0.413536052245775,0.647142602455851,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,3.13979456079692,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,3.95572084034114,0,0.111443384277478,0,0.23874448473769,0,0.921482106297696,0,0.703347082052564,0,0,0.422250816255987,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,1.479651084554,0,0,0,0.463840490809256,1.99613798001194,0.520855522170466,0,1.44999915086959,0,0,0.236387681767936,0,0,0.173624994933292,0,1.08536794762867,0,0.331737779793674,0,2.19385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,2.38835424159016,1.83309043480088,0,0,0,0.269604531922708,0,0.468528891450678,0.182454789215666,0,0,1.18375320854817,1.20990716048664,0.30607276163049,0.063186579628488,0.450970258243478,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,1.92199335066233,0,0,0,0.246346371159628,0.969890164884194,0,0.677942222341597,0,0,0.126621591911757,0,0,1.49417096317547,0,0,0,0.343189995723929,0.14405479798815,0,0,0,0.104602846312333,0,0,0,4.24406674565178,0,0.429765441419957,0,1.95497680890578,0.687481272035051,4.30723814746088,0.599037001496973,0.429226048136571,0.669514372325618,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,1.63444087333891,0,0,0,0,0,0.121499113316049,0.335434687599266,1.57611414598396,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,1.08599920350743,0,0,0,0,0,0,0.879313402068495,1.32506888912221,1.16354660725395,1.19009341568421,0,0,2.66968531419237,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0.854183854313742,1.001527445652,0.573409195690071,1.22021956690538,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.285465333544967,0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| ||
|short_description=p@chr2:133013437..133013446,- | |short_description=p@chr2:133013437..133013446,- | ||
}} | }} |
Latest revision as of 00:23, 29 July 2015
Short description: | p@chr2:133013437..133013446, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133013437..133013446, - |
Coexpression cluster: | C375_optic_Cardiac_occipital_hippocampus_amygdala_heart_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.49e-25 | 114 |
male genital duct | 9.06e-12 | 3 |
internal male genitalia | 9.06e-12 | 3 |
brain grey matter | 6.28e-10 | 34 |
gray matter | 6.28e-10 | 34 |
neural nucleus | 1.21e-09 | 9 |
nucleus of brain | 1.21e-09 | 9 |
neural plate | 1.27e-09 | 82 |
presumptive neural plate | 1.27e-09 | 82 |
neurectoderm | 5.39e-09 | 86 |
neural tube | 5.90e-09 | 56 |
neural rod | 5.90e-09 | 56 |
future spinal cord | 5.90e-09 | 56 |
neural keel | 5.90e-09 | 56 |
duct of male reproductive system | 6.22e-09 | 4 |
atrioventricular valve | 8.49e-09 | 2 |
regional part of nervous system | 3.28e-08 | 53 |
regional part of brain | 3.28e-08 | 53 |
locus ceruleus | 8.58e-08 | 2 |
brainstem nucleus | 8.58e-08 | 2 |
hindbrain nucleus | 8.58e-08 | 2 |
ecto-epithelium | 9.42e-08 | 104 |
anatomical conduit | 1.09e-07 | 240 |
nervous system | 3.01e-07 | 89 |
central nervous system | 3.02e-07 | 81 |
regional part of telencephalon | 3.99e-07 | 32 |
brain | 8.14e-07 | 68 |
future brain | 8.14e-07 | 68 |