FFCP PHASE1:Hg19::chr2:127790367..127790404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:127790367..127790404,+ | |||
|coexpression_cluster_id=C52 | |coexpression_cluster_id=C52 | ||
|description=CAGE_peak_at_chr2:127790367..127790404,+ | |description=CAGE_peak_at_chr2:127790367..127790404,+ | ||
|id=chr2:127790367..127790404,+ | |id=chr2:127790367..127790404,+ | ||
|ontology_enrichment_celltype=CL:0000080!4.26e-13!6;CL:0002195!2.99e-10!2;CL:0002571!2.99e-10!2;CL:0002590!2.79e-07!3;CL:0000084!3.14e-07!25;CL:0000827!3.14e-07!25 | |ontology_enrichment_celltype=CL:0000080!4.26e-13!6;CL:0002195!2.99e-10!2;CL:0002571!2.99e-10!2;CL:0002590!2.79e-07!3;CL:0000084!3.14e-07!25;CL:0000827!3.14e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25!CL:0000542;3.82e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;3.82e-10;53 | |||
|ontology_enrichment_disease=DOID:0060060!1.08e-19!1;DOID:0060061!1.08e-19!1;DOID:8691!1.08e-19!1;DOID:0060058!3.59e-17!10 | |ontology_enrichment_disease=DOID:0060060!1.08e-19!1;DOID:0060061!1.08e-19!1;DOID:8691!1.08e-19!1;DOID:0060058!3.59e-17!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.55e-98;1!DOID:0060061;2.55e-98;1!DOID:8691;2.55e-98;1!DOID:0060058;2.00e-40;10!DOID:2531;4.61e-08;51!DOID:0060083;4.61e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.55e-98,1;DOID:0060061,2.55e-98,1;DOID:8691,2.55e-98,1;DOID:0060058,2.00e-40,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001876!3.27e-10!2;UBERON:0002331!3.14e-08!10;UBERON:0000358!3.14e-08!10;UBERON:0000307!3.14e-08!10;UBERON:0000091!3.14e-08!10;UBERON:0000087!3.14e-08!10;UBERON:0007806!3.14e-08!10;UBERON:0008780!3.14e-08!10;UBERON:0005728!3.14e-08!10 | |ontology_enrichment_uberon=UBERON:0001876!3.27e-10!2;UBERON:0002331!3.14e-08!10;UBERON:0000358!3.14e-08!10;UBERON:0000307!3.14e-08!10;UBERON:0000091!3.14e-08!10;UBERON:0000087!3.14e-08!10;UBERON:0007806!3.14e-08!10;UBERON:0008780!3.14e-08!10;UBERON:0005728!3.14e-08!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:127790367..127790404,+ | |short_description=p@chr2:127790367..127790404,+ | ||
}} | }} |
Latest revision as of 00:04, 29 July 2015
Short description: | p@chr2:127790367..127790404, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:127790367..127790404, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.55e-98 | 1 |
cutaneous T cell lymphoma | 2.55e-98 | 1 |
mycosis fungoides | 2.55e-98 | 1 |
lymphoma | 2.00e-40 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |