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FFCP PHASE1:Hg19::chr2:127790367..127790404,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr2:127790367..127790404,+
|coexpression_cluster_id=C52
|description=CAGE_peak_at_chr2:127790367..127790404,+
|description=CAGE_peak_at_chr2:127790367..127790404,+
|id=chr2:127790367..127790404,+
|id=chr2:127790367..127790404,+
|ontology_enrichment_celltype=CL:0000080!4.26e-13!6;CL:0002195!2.99e-10!2;CL:0002571!2.99e-10!2;CL:0002590!2.79e-07!3;CL:0000084!3.14e-07!25;CL:0000827!3.14e-07!25
|ontology_enrichment_celltype=CL:0000080!4.26e-13!6;CL:0002195!2.99e-10!2;CL:0002571!2.99e-10!2;CL:0002590!2.79e-07!3;CL:0000084!3.14e-07!25;CL:0000827!3.14e-07!25
|ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25!CL:0000542;3.82e-10;53
|ontology_enrichment_celltype_v019_2=CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53
|ontology_enrichment_development_v019=CL:0000051;3.82e-10;53
|ontology_enrichment_disease=DOID:0060060!1.08e-19!1;DOID:0060061!1.08e-19!1;DOID:8691!1.08e-19!1;DOID:0060058!3.59e-17!10
|ontology_enrichment_disease=DOID:0060060!1.08e-19!1;DOID:0060061!1.08e-19!1;DOID:8691!1.08e-19!1;DOID:0060058!3.59e-17!10
|ontology_enrichment_disease_v019=DOID:0060060;2.55e-98;1!DOID:0060061;2.55e-98;1!DOID:8691;2.55e-98;1!DOID:0060058;2.00e-40;10!DOID:2531;4.61e-08;51!DOID:0060083;4.61e-08;51
|ontology_enrichment_disease_v019_2=DOID:0060060,2.55e-98,1;DOID:0060061,2.55e-98,1;DOID:8691,2.55e-98,1;DOID:0060058,2.00e-40,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51
|ontology_enrichment_uberon=UBERON:0001876!3.27e-10!2;UBERON:0002331!3.14e-08!10;UBERON:0000358!3.14e-08!10;UBERON:0000307!3.14e-08!10;UBERON:0000091!3.14e-08!10;UBERON:0000087!3.14e-08!10;UBERON:0007806!3.14e-08!10;UBERON:0008780!3.14e-08!10;UBERON:0005728!3.14e-08!10
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8129987334127,0,0,0,0,0,0.140669416410513,0,0.988823245360557,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr2:127790367..127790404,+
|short_description=p@chr2:127790367..127790404,+
}}
}}

Latest revision as of 00:04, 29 July 2015

Short description:p@chr2:127790367..127790404, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr2:127790367..127790404, +
Coexpression cluster:C52_adult_NK_chronic_cord_testis_embryonic_myeloma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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2.5
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12.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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