FFCP PHASE1:Hg19::chr2:119748190..119748210,-: Difference between revisions
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|id=chr2:119748190..119748210,-
|short_description=p@chr2:119748190..119748210,-
|description=CAGE_peak_at_chr2:119748190..119748210,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:119748190..119748210,- | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_at_chr2:119748190..119748210,- | |||
|id=chr2:119748190..119748210,- | |||
|ontology_enrichment_celltype=CL:0002194!5.15e-22!63;CL:0000576!5.15e-22!63;CL:0000040!5.15e-22!63;CL:0000559!5.15e-22!63;CL:0002009!3.88e-21!65;CL:0000839!3.66e-19!70;CL:0000557!8.41e-19!71;CL:0000766!3.87e-17!76;CL:0002057!2.41e-13!42;CL:0000860!3.43e-12!45;CL:0002393!1.41e-10!9;CL:0002397!1.41e-10!9;CL:0000763!1.43e-10!112;CL:0000049!1.43e-10!112;CL:0002619!3.01e-10!3;CL:0002087!1.40e-09!119;CL:0002031!4.13e-08!124;CL:0000235!1.02e-07!10;CL:0000738!3.12e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002619;6.05e-43;3!CL:0000235;1.73e-38;6!CL:0000473;1.70e-07;39!CL:0000234;1.70e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,8.09e-43,3;CL:0000235,2.55e-38,6;CL:0002194,1.90e-14,59;CL:0000576,1.90e-14,59;CL:0000040,1.90e-14,59;CL:0000559,1.90e-14,59;CL:0002009,5.84e-14,61;CL:0000839,7.23e-13,66;CL:0000557,1.15e-12,67;CL:0000766,9.43e-12,72;CL:0000763,1.27e-07,108;CL:0000049,1.27e-07,108;CL:0000473,2.08e-07,48;CL:0000234,2.08e-07,48;CL:0002087,4.08e-07,115;CL:0002031,8.66e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.31e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.11e-20!115;UBERON:0002371!5.85e-16!80;UBERON:0002390!6.88e-16!102;UBERON:0003061!6.88e-16!102;UBERON:0002193!4.05e-15!112;UBERON:0001474!2.12e-14!86;UBERON:0007023!1.31e-13!115;UBERON:0004765!2.51e-11!101;UBERON:0001434!2.51e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.44e-16;1!UBERON:0006518;6.44e-16;1!UBERON:0008949;6.44e-16;1!UBERON:0000101;6.44e-16;1!UBERON:0002167;6.44e-16;1!UBERON:0000029;2.06e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.44e-16,1;UBERON:0006518,6.44e-16,1;UBERON:0008949,6.44e-16,1;UBERON:0000101,6.44e-16,1;UBERON:0002167,6.44e-16,1;UBERON:0000029,1.16e-15,1;UBERON:0002405,2.29e-11,93;UBERON:0002371,4.19e-11,76;UBERON:0001474,3.00e-10,82;UBERON:0002193,1.13e-09,108;UBERON:0004765,2.78e-09,90;UBERON:0002390,1.80e-08,98;UBERON:0003061,1.80e-08,98;UBERON:0001434,2.74e-08,100 | |||
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| ||
|short_description=p@chr2:119748190..119748210,- | |||
}} | }} |
Latest revision as of 23:51, 28 July 2015
Short description: | p@chr2:119748190..119748210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:119748190..119748210, - |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 8.09e-43 | 3 |
macrophage | 2.55e-38 | 6 |
monopoietic cell | 1.90e-14 | 59 |
monocyte | 1.90e-14 | 59 |
monoblast | 1.90e-14 | 59 |
promonocyte | 1.90e-14 | 59 |
macrophage dendritic cell progenitor | 5.84e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.23e-13 | 66 |
granulocyte monocyte progenitor cell | 1.15e-12 | 67 |
myeloid leukocyte | 9.43e-12 | 72 |
myeloid cell | 1.27e-07 | 108 |
common myeloid progenitor | 1.27e-07 | 108 |
defensive cell | 2.08e-07 | 48 |
phagocyte | 2.08e-07 | 48 |
nongranular leukocyte | 4.08e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 8.66e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.44e-16 | 1 |
right lung lobe | 6.44e-16 | 1 |
lower lobe of lung | 6.44e-16 | 1 |
lobe of lung | 6.44e-16 | 1 |
right lung | 6.44e-16 | 1 |
lymph node | 1.16e-15 | 1 |
immune system | 2.29e-11 | 93 |
bone marrow | 4.19e-11 | 76 |
bone element | 3.00e-10 | 82 |
hemolymphoid system | 1.13e-09 | 108 |
skeletal element | 2.78e-09 | 90 |
hematopoietic system | 1.80e-08 | 98 |
blood island | 1.80e-08 | 98 |
skeletal system | 2.74e-08 | 100 |