FFCP PHASE1:Hg19::chr2:114018100..114018127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:114018100..114018127,- | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_at_chr2:114018100..114018127,- | |description=CAGE_peak_at_chr2:114018100..114018127,- | ||
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|ontology_enrichment_celltype=CL:0002149!7.54e-23!6;CL:0002255!7.54e-23!6;CL:0000159!5.22e-12!2;CL:0000313!6.43e-07!1;CL:0000319!9.48e-07!1 | |ontology_enrichment_celltype=CL:0002149!7.54e-23!6;CL:0002255!7.54e-23!6;CL:0000159!5.22e-12!2;CL:0000313!6.43e-07!1;CL:0000319!9.48e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002149;7.80e-07;6!CL:0002255;7.80e-07;6 | |ontology_enrichment_celltype_v019=CL:0002149;7.80e-07;6!CL:0002255;7.80e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.38e-27;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.38e-27;5 | ||
|ontology_enrichment_disease=DOID:3001!7.54e-23!6;DOID:120!2.75e-18!27;DOID:193!6.75e-17!29;DOID:299!2.14e-16!25;DOID:4468!2.29e-12!2;DOID:305!3.53e-07!106;DOID:2152!6.43e-07!1;DOID:3030!9.48e-07!1 | |ontology_enrichment_disease=DOID:3001!7.54e-23!6;DOID:120!2.75e-18!27;DOID:193!6.75e-17!29;DOID:299!2.14e-16!25;DOID:4468!2.29e-12!2;DOID:305!3.53e-07!106;DOID:2152!6.43e-07!1;DOID:3030!9.48e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;7.05e-18;2!DOID:3001;7.80e-07;6 | |ontology_enrichment_disease_v019=DOID:4468;7.05e-18;2!DOID:3001;7.80e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,7.67e-18,2;DOID:3001,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004175!1.44e-19!25;UBERON:0002046!9.54e-18!5;UBERON:0004117!9.54e-18!5;UBERON:0007689!9.54e-18!5;UBERON:0007123!9.54e-18!5;UBERON:0003091!9.54e-18!5;UBERON:0006947!1.53e-16!3;UBERON:0004054!1.53e-16!3;UBERON:0003133!5.89e-16!48;UBERON:0005904!1.53e-12!4;UBERON:0005156!1.74e-12!59;UBERON:0000990!1.74e-12!59;UBERON:0000341!8.51e-12!2;UBERON:0000995!1.09e-11!21;UBERON:0002113!2.10e-11!27;UBERON:0003918!2.10e-11!27;UBERON:0005095!2.10e-11!27;UBERON:0007687!2.10e-11!27;UBERON:0005795!4.08e-11!22;UBERON:0003975!4.08e-11!22;UBERON:0003134!3.33e-10!37;UBERON:0000474!3.33e-10!37;UBERON:0000489!1.97e-09!32;UBERON:0003100!4.63e-09!41;UBERON:0009722!4.04e-08!11;UBERON:0007690!4.04e-08!11;UBERON:0003135!9.25e-08!11;UBERON:0004911!6.43e-07!1;UBERON:0001000!8.49e-07!1;UBERON:0005352!8.49e-07!1 | |ontology_enrichment_uberon=UBERON:0004175!1.44e-19!25;UBERON:0002046!9.54e-18!5;UBERON:0004117!9.54e-18!5;UBERON:0007689!9.54e-18!5;UBERON:0007123!9.54e-18!5;UBERON:0003091!9.54e-18!5;UBERON:0006947!1.53e-16!3;UBERON:0004054!1.53e-16!3;UBERON:0003133!5.89e-16!48;UBERON:0005904!1.53e-12!4;UBERON:0005156!1.74e-12!59;UBERON:0000990!1.74e-12!59;UBERON:0000341!8.51e-12!2;UBERON:0000995!1.09e-11!21;UBERON:0002113!2.10e-11!27;UBERON:0003918!2.10e-11!27;UBERON:0005095!2.10e-11!27;UBERON:0007687!2.10e-11!27;UBERON:0005795!4.08e-11!22;UBERON:0003975!4.08e-11!22;UBERON:0003134!3.33e-10!37;UBERON:0000474!3.33e-10!37;UBERON:0000489!1.97e-09!32;UBERON:0003100!4.63e-09!41;UBERON:0009722!4.04e-08!11;UBERON:0007690!4.04e-08!11;UBERON:0003135!9.25e-08!11;UBERON:0004911!6.43e-07!1;UBERON:0001000!8.49e-07!1;UBERON:0005352!8.49e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.38e-27;5!UBERON:0000341;1.07e-17;2!UBERON:0000974;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002046;2.38e-27;5!UBERON:0000341;1.07e-17;2!UBERON:0000974;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.72e-27,5;UBERON:0004117,2.72e-27,5;UBERON:0007689,2.72e-27,5;UBERON:0007123,2.72e-27,5;UBERON:0003091,2.72e-27,5;UBERON:0000341,9.07e-18,2;UBERON:0009722,5.10e-13,11;UBERON:0007690,5.10e-13,11;UBERON:0008814,2.42e-08,18 | |||
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|short_description=p@chr2:114018100..114018127,- | |short_description=p@chr2:114018100..114018127,- | ||
}} | }} |
Latest revision as of 23:38, 28 July 2015
Short description: | p@chr2:114018100..114018127, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:114018100..114018127, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.58e-07 | 6 |
stromal cell of endometrium | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.72e-27 | 5 |
pharyngeal pouch | 2.72e-27 | 5 |
thyroid diverticulum | 2.72e-27 | 5 |
pharyngeal pouch 2 | 2.72e-27 | 5 |
thyroid primordium | 2.72e-27 | 5 |
throat | 9.07e-18 | 2 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
pharyngeal arch system | 2.42e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.67e-18 | 2 |
female reproductive endometrioid cancer | 7.58e-07 | 6 |