FFCP PHASE1:Hg19::chr2:113984760..113984792,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113984760..113984792,+ | |||
|coexpression_cluster_id=C4118 | |coexpression_cluster_id=C4118 | ||
|description=CAGE_peak_at_chr2:113984760..113984792,+ | |description=CAGE_peak_at_chr2:113984760..113984792,+ | ||
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|ontology_enrichment_celltype=CL:1000507!8.37e-18!12;CL:1000494!8.37e-18!12;CL:1000497!2.49e-14!18;CL:0002518!2.49e-14!18;CL:1000449!5.61e-13!16;CL:0000239!4.42e-11!3;CL:1000615!4.42e-11!3;CL:0002306!4.42e-11!3;CL:0002681!2.70e-09!13;CL:0002584!2.70e-09!13;CL:0002149!2.84e-09!6;CL:0002255!2.84e-09!6;CL:0000159!2.84e-08!2;CL:0000669!7.48e-07!5 | |ontology_enrichment_celltype=CL:1000507!8.37e-18!12;CL:1000494!8.37e-18!12;CL:1000497!2.49e-14!18;CL:0002518!2.49e-14!18;CL:1000449!5.61e-13!16;CL:0000239!4.42e-11!3;CL:1000615!4.42e-11!3;CL:0002306!4.42e-11!3;CL:0002681!2.70e-09!13;CL:0002584!2.70e-09!13;CL:0002149!2.84e-09!6;CL:0002255!2.84e-09!6;CL:0000159!2.84e-08!2;CL:0000669!7.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.73e-41;10!CL:1000494;3.73e-41;10!CL:0000159;9.90e-34;2!CL:0000650;9.90e-34;2!CL:1000500;9.90e-34;2!CL:1000618;9.90e-34;2!CL:1001318;9.90e-34;2!CL:0002173;9.90e-34;2!CL:1000449;1.59e-27;15!CL:1000497;2.60e-24;17!CL:0002518;2.60e-24;17!CL:0002681;3.16e-22;12!CL:0002584;3.16e-22;12!CL:0000319;8.72e-18;1!CL:0000313;8.72e-18;1!CL:0000669;2.02e-17;4!CL:1000746;2.24e-10;7!CL:1000612;2.24e-10;7!CL:0000239;8.62e-07;3!CL:1000615;8.62e-07;3!CL:0002577;8.62e-07;3!CL:0002306;8.62e-07;3 | |ontology_enrichment_celltype_v019=CL:1000507;3.73e-41;10!CL:1000494;3.73e-41;10!CL:0000159;9.90e-34;2!CL:0000650;9.90e-34;2!CL:1000500;9.90e-34;2!CL:1000618;9.90e-34;2!CL:1001318;9.90e-34;2!CL:0002173;9.90e-34;2!CL:1000449;1.59e-27;15!CL:1000497;2.60e-24;17!CL:0002518;2.60e-24;17!CL:0002681;3.16e-22;12!CL:0002584;3.16e-22;12!CL:0000319;8.72e-18;1!CL:0000313;8.72e-18;1!CL:0000669;2.02e-17;4!CL:1000746;2.24e-10;7!CL:1000612;2.24e-10;7!CL:0000239;8.62e-07;3!CL:1000615;8.62e-07;3!CL:0002577;8.62e-07;3!CL:0002306;8.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.90e-41,10;CL:1000494,3.90e-41,10;CL:0000650,6.00e-34,2;CL:1000500,6.00e-34,2;CL:1000618,6.00e-34,2;CL:1001318,6.00e-34,2;CL:0002173,6.00e-34,2;CL:0000159,1.93e-33,2;CL:1000449,1.64e-27,15;CL:1000497,2.66e-24,17;CL:0002518,2.66e-24,17;CL:0002681,3.34e-22,12;CL:0002584,3.34e-22,12;CL:0000319,8.72e-18,1;CL:0000669,1.57e-17,4;CL:0000313,1.70e-17,1;CL:1000746,1.94e-10,7;CL:1000612,1.94e-10,7;CL:0002577,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.10e-30;5 | |ontology_enrichment_development_v019=UBERON:0007123;1.10e-30;5 | ||
|ontology_enrichment_disease=DOID:193!4.35e-14!29;DOID:120!6.35e-13!27;DOID:299!1.36e-11!25;DOID:3001!2.84e-09!6;DOID:4468!6.07e-08!2 | |ontology_enrichment_disease=DOID:193!4.35e-14!29;DOID:120!6.35e-13!27;DOID:299!1.36e-11!25;DOID:3001!2.84e-09!6;DOID:4468!6.07e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:2152;8.72e-18;1!DOID:3030;8.72e-18;1 | |ontology_enrichment_disease_v019=DOID:2152;8.72e-18;1!DOID:3030;8.72e-18;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,8.72e-18,1;DOID:2152,1.70e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!8.37e-18!12;UBERON:0001231!8.37e-18!12;UBERON:0004810!8.37e-18!12;UBERON:0002113!4.74e-16!27;UBERON:0003918!4.74e-16!27;UBERON:0005095!4.74e-16!27;UBERON:0007687!4.74e-16!27;UBERON:0006555!3.99e-15!17;UBERON:0005103!3.99e-15!17;UBERON:0000083!3.99e-15!17;UBERON:0009201!3.99e-15!17;UBERON:0004819!3.99e-15!17;UBERON:0006553!3.99e-15!17;UBERON:0003074!3.99e-15!17;UBERON:0003060!3.99e-15!17;UBERON:0000080!3.49e-14!18;UBERON:0002120!3.49e-14!18;UBERON:0004875!3.49e-14!18;UBERON:0005721!3.49e-14!18;UBERON:0005754!3.49e-14!18;UBERON:0007297!3.49e-14!18;UBERON:0000489!4.19e-13!32;UBERON:0004211!5.61e-13!16;UBERON:0001285!5.61e-13!16;UBERON:0007684!5.61e-13!16;UBERON:0003220!5.61e-13!16;UBERON:0004208!5.61e-13!16;UBERON:0004876!1.39e-12!20;UBERON:0003134!3.08e-12!37;UBERON:0000474!3.08e-12!37;UBERON:0003887!6.73e-12!21;UBERON:0003133!7.51e-12!48;UBERON:0002046!8.02e-12!5;UBERON:0004117!8.02e-12!5;UBERON:0007689!8.02e-12!5;UBERON:0007123!8.02e-12!5;UBERON:0003091!8.02e-12!5;UBERON:0006853!4.42e-11!3;UBERON:0007685!4.42e-11!3;UBERON:0004134!4.42e-11!3;UBERON:0003100!9.29e-11!41;UBERON:0003886!6.97e-10!63;UBERON:0001225!2.70e-09!13;UBERON:0008987!2.70e-09!13;UBERON:0000058!2.87e-09!26;UBERON:0004175!4.81e-09!25;UBERON:0005156!5.29e-09!59;UBERON:0000990!5.29e-09!59;UBERON:0000995!8.04e-09!21;UBERON:0006554!8.64e-09!44;UBERON:0001008!1.55e-08!45;UBERON:0002553!1.59e-08!70;UBERON:0005795!2.33e-08!22;UBERON:0003975!2.33e-08!22;UBERON:0005172!1.13e-07!55;UBERON:0005173!1.13e-07!55;UBERON:0001851!2.09e-07!16;UBERON:0000353!6.31e-07!17 | |ontology_enrichment_uberon=UBERON:0009773!8.37e-18!12;UBERON:0001231!8.37e-18!12;UBERON:0004810!8.37e-18!12;UBERON:0002113!4.74e-16!27;UBERON:0003918!4.74e-16!27;UBERON:0005095!4.74e-16!27;UBERON:0007687!4.74e-16!27;UBERON:0006555!3.99e-15!17;UBERON:0005103!3.99e-15!17;UBERON:0000083!3.99e-15!17;UBERON:0009201!3.99e-15!17;UBERON:0004819!3.99e-15!17;UBERON:0006553!3.99e-15!17;UBERON:0003074!3.99e-15!17;UBERON:0003060!3.99e-15!17;UBERON:0000080!3.49e-14!18;UBERON:0002120!3.49e-14!18;UBERON:0004875!3.49e-14!18;UBERON:0005721!3.49e-14!18;UBERON:0005754!3.49e-14!18;UBERON:0007297!3.49e-14!18;UBERON:0000489!4.19e-13!32;UBERON:0004211!5.61e-13!16;UBERON:0001285!5.61e-13!16;UBERON:0007684!5.61e-13!16;UBERON:0003220!5.61e-13!16;UBERON:0004208!5.61e-13!16;UBERON:0004876!1.39e-12!20;UBERON:0003134!3.08e-12!37;UBERON:0000474!3.08e-12!37;UBERON:0003887!6.73e-12!21;UBERON:0003133!7.51e-12!48;UBERON:0002046!8.02e-12!5;UBERON:0004117!8.02e-12!5;UBERON:0007689!8.02e-12!5;UBERON:0007123!8.02e-12!5;UBERON:0003091!8.02e-12!5;UBERON:0006853!4.42e-11!3;UBERON:0007685!4.42e-11!3;UBERON:0004134!4.42e-11!3;UBERON:0003100!9.29e-11!41;UBERON:0003886!6.97e-10!63;UBERON:0001225!2.70e-09!13;UBERON:0008987!2.70e-09!13;UBERON:0000058!2.87e-09!26;UBERON:0004175!4.81e-09!25;UBERON:0005156!5.29e-09!59;UBERON:0000990!5.29e-09!59;UBERON:0000995!8.04e-09!21;UBERON:0006554!8.64e-09!44;UBERON:0001008!1.55e-08!45;UBERON:0002553!1.59e-08!70;UBERON:0005795!2.33e-08!22;UBERON:0003975!2.33e-08!22;UBERON:0005172!1.13e-07!55;UBERON:0005173!1.13e-07!55;UBERON:0001851!2.09e-07!16;UBERON:0000353!6.31e-07!17 | ||
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| ||
|short_description=p@chr2:113984760..113984792,+ | |short_description=p@chr2:113984760..113984792,+ | ||
}} | }} |
Latest revision as of 23:37, 28 July 2015
Short description: | p@chr2:113984760..113984792, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113984760..113984792, + |
Coexpression cluster: | C4118_thyroid_clear_kidney_anaplastic_Renal_serous_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.90e-41 | 10 |
nephron tubule epithelial cell | 3.90e-41 | 10 |
mesangial cell | 6.00e-34 | 2 |
kidney interstitial cell | 6.00e-34 | 2 |
juxtaglomerular complex cell | 6.00e-34 | 2 |
renal interstitial pericyte | 6.00e-34 | 2 |
extraglomerular mesangial cell | 6.00e-34 | 2 |
seromucus secreting cell | 1.93e-33 | 2 |
epithelial cell of nephron | 1.64e-27 | 15 |
kidney cell | 2.66e-24 | 17 |
kidney epithelial cell | 2.66e-24 | 17 |
kidney cortical cell | 3.34e-22 | 12 |
renal cortical epithelial cell | 3.34e-22 | 12 |
mucus secreting cell | 8.72e-18 | 1 |
pericyte cell | 1.57e-17 | 4 |
serous secreting cell | 1.70e-17 | 1 |
glomerular cell | 1.94e-10 | 7 |
kidney corpuscule cell | 1.94e-10 | 7 |
placental epithelial cell | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.72e-18 | 1 |
ovary epithelial cancer | 1.70e-17 | 1 |