FFCP PHASE1:Hg19::chr2:113981700..113981750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113981700..113981750,- | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_at_chr2:113981700..113981750,- | |description=CAGE_peak_at_chr2:113981700..113981750,- | ||
|id=chr2:113981700..113981750,- | |id=chr2:113981700..113981750,- | ||
|ontology_enrichment_celltype=CL:0000159!7.07e-10!2;CL:0002149!2.23e-07!6;CL:0002255!2.23e-07!6 | |ontology_enrichment_celltype=CL:0000159!7.07e-10!2;CL:0002149!2.23e-07!6;CL:0002255!2.23e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.19e-17;6!CL:0002255;2.19e-17;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.19e-17,6;CL:0002255,2.19e-17,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.62e-26;1!UBERON:0005795;8.66e-23;10!UBERON:0003056;1.53e-09;3 | |||
|ontology_enrichment_disease=DOID:299!4.43e-10!25;DOID:4468!6.20e-10!2;DOID:3001!2.23e-07!6 | |ontology_enrichment_disease=DOID:299!4.43e-10!25;DOID:4468!6.20e-10!2;DOID:3001!2.23e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3001;2.19e-17;6!DOID:4468;8.28e-14;2!DOID:299;1.35e-09;25!DOID:120;6.23e-09;27!DOID:193;2.33e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.19e-17,6;DOID:4468,8.28e-14,2;DOID:299,1.35e-09,25;DOID:120,6.23e-09,27;DOID:193,2.33e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002046!2.27e-14!5;UBERON:0004117!2.27e-14!5;UBERON:0007689!2.27e-14!5;UBERON:0007123!2.27e-14!5;UBERON:0003091!2.27e-14!5;UBERON:0006947!3.61e-14!3;UBERON:0004054!3.61e-14!3;UBERON:0005904!9.66e-11!4;UBERON:0002133!6.77e-10!2;UBERON:0002113!5.85e-09!27;UBERON:0003918!5.85e-09!27;UBERON:0005095!5.85e-09!27;UBERON:0007687!5.85e-09!27;UBERON:0004175!7.88e-08!25;UBERON:0000489!2.30e-07!32;UBERON:0003978!7.36e-07!3;UBERON:0009751!7.36e-07!3;UBERON:0000946!7.36e-07!3;UBERON:0002523!7.36e-07!3;UBERON:0005983!7.36e-07!3;UBERON:0002165!7.36e-07!3;UBERON:0002062!7.36e-07!3;UBERON:0007280!7.36e-07!3 | |ontology_enrichment_uberon=UBERON:0002046!2.27e-14!5;UBERON:0004117!2.27e-14!5;UBERON:0007689!2.27e-14!5;UBERON:0007123!2.27e-14!5;UBERON:0003091!2.27e-14!5;UBERON:0006947!3.61e-14!3;UBERON:0004054!3.61e-14!3;UBERON:0005904!9.66e-11!4;UBERON:0002133!6.77e-10!2;UBERON:0002113!5.85e-09!27;UBERON:0003918!5.85e-09!27;UBERON:0005095!5.85e-09!27;UBERON:0007687!5.85e-09!27;UBERON:0004175!7.88e-08!25;UBERON:0000489!2.30e-07!32;UBERON:0003978!7.36e-07!3;UBERON:0009751!7.36e-07!3;UBERON:0000946!7.36e-07!3;UBERON:0002523!7.36e-07!3;UBERON:0005983!7.36e-07!3;UBERON:0002165!7.36e-07!3;UBERON:0002062!7.36e-07!3;UBERON:0007280!7.36e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.78e-26;1!UBERON:0005352;2.78e-26;1!UBERON:0005795;7.62e-26;1!UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0004175;2.61e-11;21!UBERON:0006947;1.10e-09;3!UBERON:0004054;1.10e-09;3!UBERON:0005904;1.40e-07;4!UBERON:0000995;9.37e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.78e-26,1;UBERON:0005352,2.78e-26,1;UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0005795,9.38e-11,22;UBERON:0006947,1.10e-09,3;UBERON:0004054,1.10e-09,3;UBERON:0004175,1.31e-09,25;UBERON:0005904,1.40e-07,4;UBERON:0001781,1.69e-07,4 | |||
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| ||
|short_description=p@chr2:113981700..113981750,- | |short_description=p@chr2:113981700..113981750,- | ||
}} | }} |
Latest revision as of 23:36, 28 July 2015
Short description: | p@chr2:113981700..113981750, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113981700..113981750, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.19e-17 | 6 |
stromal cell of endometrium | 2.19e-17 | 6 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.78e-26 | 1 |
spermatic cord | 2.78e-26 | 1 |
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
embryonic uterus | 9.38e-11 | 22 |
male genital duct | 1.10e-09 | 3 |
internal male genitalia | 1.10e-09 | 3 |
internal genitalia | 1.31e-09 | 25 |
duct of male reproductive system | 1.40e-07 | 4 |
layer of retina | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.19e-17 | 6 |
clear cell adenocarcinoma | 8.28e-14 | 2 |
adenocarcinoma | 1.35e-09 | 25 |
female reproductive organ cancer | 6.23e-09 | 27 |
reproductive organ cancer | 2.33e-08 | 29 |