FFCP PHASE1:Hg19::chr2:113981079..113981089,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113981079..113981089,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113981079..113981089,- | |description=CAGE_peak_at_chr2:113981079..113981089,- | ||
|id=chr2:113981079..113981089,- | |id=chr2:113981079..113981089,- | ||
|ontology_enrichment_celltype=CL:0002149!1.80e-10!6;CL:0002255!1.80e-10!6;CL:0000239!1.73e-09!3;CL:1000615!1.73e-09!3;CL:0002306!1.73e-09!3;CL:0000313!5.22e-08!1;CL:0002681!6.52e-08!13;CL:0002584!6.52e-08!13 | |ontology_enrichment_celltype=CL:0002149!1.80e-10!6;CL:0002255!1.80e-10!6;CL:0000239!1.73e-09!3;CL:1000615!1.73e-09!3;CL:0002306!1.73e-09!3;CL:0000313!5.22e-08!1;CL:0002681!6.52e-08!13;CL:0002584!6.52e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0000313;5.12e-50;1!CL:0000159;8.10e-26;2!CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,6.58e-50,1;CL:0000159,9.18e-26,2;CL:0002149,1.44e-09,6;CL:0002255,1.44e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.66e-11;5 | |||
|ontology_enrichment_disease=DOID:120!8.47e-18!27;DOID:193!1.81e-16!29;DOID:4468!9.23e-14!2;DOID:3001!1.80e-10!6;DOID:299!7.19e-09!25;DOID:2152!5.22e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.12e-50;1!DOID:4468;5.56e-26;2!DOID:299;1.23e-18;25!DOID:120;2.47e-17;27!DOID:193;3.30e-16;29!DOID:3001;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.58e-50,1;DOID:4468,5.56e-26,2;DOID:299,1.23e-18,25;DOID:120,2.47e-17,27;DOID:193,3.30e-16,29;DOID:3001,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.30e-21!5;UBERON:0004117!6.30e-21!5;UBERON:0007689!6.30e-21!5;UBERON:0007123!6.30e-21!5;UBERON:0003091!6.30e-21!5;UBERON:0003133!5.10e-14!48;UBERON:0002113!8.89e-14!27;UBERON:0003918!8.89e-14!27;UBERON:0005095!8.89e-14!27;UBERON:0007687!8.89e-14!27;UBERON:0000080!3.36e-12!18;UBERON:0002120!3.36e-12!18;UBERON:0004875!3.36e-12!18;UBERON:0005721!3.36e-12!18;UBERON:0005754!3.36e-12!18;UBERON:0007297!3.36e-12!18;UBERON:0004175!1.12e-11!25;UBERON:0000489!1.91e-11!32;UBERON:0005156!4.99e-11!59;UBERON:0000990!4.99e-11!59;UBERON:0004876!6.31e-11!20;UBERON:0003887!2.22e-10!21;UBERON:0003134!7.32e-10!37;UBERON:0000474!7.32e-10!37;UBERON:0006947!1.23e-09!3;UBERON:0004054!1.23e-09!3;UBERON:0009722!1.36e-09!11;UBERON:0007690!1.36e-09!11;UBERON:0006853!1.73e-09!3;UBERON:0007685!1.73e-09!3;UBERON:0004134!1.73e-09!3;UBERON:0006555!4.25e-09!17;UBERON:0005103!4.25e-09!17;UBERON:0000083!4.25e-09!17;UBERON:0009201!4.25e-09!17;UBERON:0004819!4.25e-09!17;UBERON:0006553!4.25e-09!17;UBERON:0003074!4.25e-09!17;UBERON:0003060!4.25e-09!17;UBERON:0003100!8.72e-09!41;UBERON:0003886!2.47e-08!63;UBERON:0000058!2.82e-08!26;UBERON:0006554!5.21e-08!44;UBERON:0004911!5.22e-08!1;UBERON:0000998!5.58e-08!1;UBERON:0006868!5.58e-08!1;UBERON:0001225!6.52e-08!13;UBERON:0008987!6.52e-08!13;UBERON:0001008!8.33e-08!45;UBERON:0001301!1.01e-07!1;UBERON:0000991!1.83e-07!21;UBERON:0009196!1.83e-07!21;UBERON:0009117!1.83e-07!21;UBERON:0005564!1.83e-07!21;UBERON:0005904!1.98e-07!4;UBERON:0000995!2.25e-07!21;UBERON:0002553!2.49e-07!70;UBERON:0004176!4.10e-07!22;UBERON:0008814!4.70e-07!15;UBERON:0005795!5.01e-07!22;UBERON:0003975!5.01e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.12e-50;1!UBERON:0004909;8.10e-26;2!UBERON:0002046;2.66e-11;5!UBERON:0000474;3.81e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.58e-50,1;UBERON:0004909,9.18e-26,2;UBERON:0002046,2.66e-11,5;UBERON:0004117,2.66e-11,5;UBERON:0007689,2.66e-11,5;UBERON:0007123,2.66e-11,5;UBERON:0003091,2.66e-11,5 | |||
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|short_description=p@chr2:113981079..113981089,- | |short_description=p@chr2:113981079..113981089,- | ||
}} | }} |
Latest revision as of 23:36, 28 July 2015
Short description: | p@chr2:113981079..113981089, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113981079..113981089, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.58e-50 | 1 |
seromucus secreting cell | 9.18e-26 | 2 |
epithelial cell of uterus | 1.44e-09 | 6 |
stromal cell of endometrium | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.58e-50 | 1 |
epithelium of gonad | 9.18e-26 | 2 |
thyroid gland | 2.66e-11 | 5 |
pharyngeal pouch | 2.66e-11 | 5 |
thyroid diverticulum | 2.66e-11 | 5 |
pharyngeal pouch 2 | 2.66e-11 | 5 |
thyroid primordium | 2.66e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.58e-50 | 1 |
clear cell adenocarcinoma | 5.56e-26 | 2 |
adenocarcinoma | 1.23e-18 | 25 |
female reproductive organ cancer | 2.47e-17 | 27 |
reproductive organ cancer | 3.30e-16 | 29 |
female reproductive endometrioid cancer | 1.44e-09 | 6 |