FFCP PHASE1:Hg19::chr2:113979700..113979709,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:113979700..113979709,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113979700..113979709,- | |||
|id=chr2:113979700..113979709,- | |||
|ontology_enrichment_celltype=CL:0000159!1.28e-14!2;CL:0002149!5.11e-11!6;CL:0002255!5.11e-11!6;CL:1000497!5.33e-09!18;CL:0002518!5.33e-09!18;CL:1000507!5.48e-09!12;CL:1000494!5.48e-09!12;CL:0000313!2.71e-08!1;CL:0000319!5.05e-08!1;CL:1000449!9.11e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.59e-12;6!CL:0002255;2.59e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.40e-14;5!UBERON:0005795;6.34e-08;10 | |||
|ontology_enrichment_disease=DOID:120!1.48e-11!27;DOID:3001!5.11e-11!6;DOID:193!1.06e-10!29;DOID:299!1.83e-09!25;DOID:2152!2.71e-08!1;DOID:3030!5.05e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.96e-34;2!DOID:3001;2.59e-12;6!DOID:299;1.15e-11;25!DOID:120;6.90e-11;27!DOID:193;3.24e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.04e-34,2;DOID:3001,2.74e-12,6;DOID:299,1.15e-11,25;DOID:120,6.90e-11,27;DOID:193,3.24e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0002046!8.04e-22!5;UBERON:0004117!8.04e-22!5;UBERON:0007689!8.04e-22!5;UBERON:0007123!8.04e-22!5;UBERON:0003091!8.04e-22!5;UBERON:0000341!6.02e-15!2;UBERON:0002113!1.25e-14!27;UBERON:0003918!1.25e-14!27;UBERON:0005095!1.25e-14!27;UBERON:0007687!1.25e-14!27;UBERON:0000489!3.61e-12!32;UBERON:0006947!4.79e-10!3;UBERON:0004054!4.79e-10!3;UBERON:0009722!5.12e-10!11;UBERON:0007690!5.12e-10!11;UBERON:0006555!1.37e-09!17;UBERON:0005103!1.37e-09!17;UBERON:0000083!1.37e-09!17;UBERON:0009201!1.37e-09!17;UBERON:0004819!1.37e-09!17;UBERON:0006553!1.37e-09!17;UBERON:0003074!1.37e-09!17;UBERON:0003060!1.37e-09!17;UBERON:0004175!2.77e-09!25;UBERON:0000080!4.80e-09!18;UBERON:0002120!4.80e-09!18;UBERON:0004875!4.80e-09!18;UBERON:0005721!4.80e-09!18;UBERON:0005754!4.80e-09!18;UBERON:0007297!4.80e-09!18;UBERON:0009773!5.48e-09!12;UBERON:0001231!5.48e-09!12;UBERON:0004810!5.48e-09!12;UBERON:0000058!1.00e-08!26;UBERON:0006554!1.52e-08!44;UBERON:0001008!2.49e-08!45;UBERON:0004911!2.71e-08!1;UBERON:0001000!3.34e-08!1;UBERON:0005352!3.34e-08!1;UBERON:0004876!4.05e-08!20;UBERON:0001301!4.11e-08!1;UBERON:0003133!6.69e-08!48;UBERON:0005904!9.64e-08!4;UBERON:0003887!1.01e-07!21;UBERON:0008814!2.26e-07!15;UBERON:0004211!9.11e-07!16;UBERON:0001285!9.11e-07!16;UBERON:0007684!9.11e-07!16;UBERON:0003220!9.11e-07!16;UBERON:0004208!9.11e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0,0,0.112131862580613,0.381882949668989,3.43599221228973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:113979700..113979709,- | |||
}} |
Latest revision as of 23:36, 28 July 2015
Short description: | p@chr2:113979700..113979709, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113979700..113979709, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.04e-34 | 2 |
female reproductive endometrioid cancer | 2.74e-12 | 6 |
adenocarcinoma | 1.15e-11 | 25 |
female reproductive organ cancer | 6.90e-11 | 27 |
reproductive organ cancer | 3.24e-10 | 29 |