FFCP PHASE1:Hg19::chr2:112669294..112669295,+: Difference between revisions
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|id=chr2:112669294..112669295,+
|short_description=p@chr2:112669294..112669295,+
|description=CAGE_peak_at_chr2:112669294..112669295,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:112669294..112669295,+ | |||
|description=CAGE_peak_at_chr2:112669294..112669295,+ | |||
|id=chr2:112669294..112669295,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;8.99e-11;3!CL:0000306;2.11e-08;4!CL:0002222;2.11e-08;4!CL:0002224;2.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,8.99e-11,3;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.78e-29;1!UBERON:0005425;1.78e-29;1!UBERON:0006965;1.78e-15;2!UBERON:0003056;8.99e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-35!115;UBERON:0001049!2.39e-18!57;UBERON:0005068!2.39e-18!57;UBERON:0006241!2.39e-18!57;UBERON:0007135!2.39e-18!57;UBERON:0003080!3.27e-17!42;UBERON:0002346!1.19e-16!90;UBERON:0002780!3.48e-16!41;UBERON:0001890!3.48e-16!41;UBERON:0006240!3.48e-16!41;UBERON:0003075!4.61e-16!86;UBERON:0007284!4.61e-16!86;UBERON:0002616!4.72e-16!59;UBERON:0000955!4.62e-15!69;UBERON:0006238!4.62e-15!69;UBERON:0003056!1.95e-14!61;UBERON:0005743!8.99e-14!86;UBERON:0000073!5.22e-13!94;UBERON:0001016!5.22e-13!94;UBERON:0001017!6.15e-13!82;UBERON:0001893!1.23e-12!34;UBERON:0002791!6.55e-12!33;UBERON:0002020!2.23e-11!34;UBERON:0003528!2.23e-11!34;UBERON:0001869!3.56e-11!32;UBERON:0002619!1.06e-09!22;UBERON:0000153!2.92e-09!129;UBERON:0007811!2.92e-09!129;UBERON:0000033!4.98e-09!123;UBERON:0000956!4.38e-08!25;UBERON:0000203!4.38e-08!25;UBERON:0000200!7.39e-08!6;UBERON:0001950!8.99e-08!20;UBERON:0000025!5.39e-07!194;UBERON:0000924!5.57e-07!173;UBERON:0006601!5.57e-07!173;UBERON:0000473!5.59e-07!8;UBERON:0000062!7.11e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.78e-29;1!UBERON:0000941;1.78e-29;1!UBERON:0001785;1.78e-29;1!UBERON:0002464;1.78e-29;1!UBERON:0004904;1.78e-29;1!UBERON:0001021;1.78e-29;1!UBERON:0002360;1.78e-15;2!UBERON:0003714;1.78e-15;2!UBERON:0005162;1.78e-15;2!UBERON:0000122;1.78e-15;2!UBERON:0000094;1.78e-15;2!UBERON:0010743;1.78e-15;2!UBERON:0010077;2.11e-08;4!UBERON:0005389;2.11e-08;4!UBERON:0000484;2.11e-08;4!UBERON:0000965;2.11e-08;4!UBERON:0001803;2.11e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.99e-30,1;UBERON:0001785,9.99e-30,1;UBERON:0002464,9.99e-30,1;UBERON:0004904,9.99e-30,1;UBERON:0001021,9.99e-30,1;UBERON:0003902,9.99e-30,1;UBERON:0005425,9.99e-30,1;UBERON:0002363,4.20e-29,1;UBERON:0007645,4.20e-29,1;UBERON:0007647,4.20e-29,1;UBERON:0010115,4.20e-29,1;UBERON:0003714,1.33e-15,2;UBERON:0005162,1.33e-15,2;UBERON:0000122,1.33e-15,2;UBERON:0002360,2.74e-15,2;UBERON:0000094,2.74e-15,2;UBERON:0010743,2.74e-15,2;UBERON:0001781,1.82e-08,4;UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4 | |||
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| ||
|short_description=p@chr2:112669294..112669295,+ | |||
}} | }} |
Latest revision as of 23:16, 28 July 2015
Short description: | p@chr2:112669294..112669295, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:112669294..112669295, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 8.99e-11 | 3 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.99e-30 | 1 |
cranial nerve | 9.99e-30 | 1 |
nerve trunk | 9.99e-30 | 1 |
nerve connecting eye with brain | 9.99e-30 | 1 |
nerve | 9.99e-30 | 1 |
retinal neural layer | 9.99e-30 | 1 |
presumptive neural retina | 9.99e-30 | 1 |
dura mater | 4.20e-29 | 1 |
future meninx | 4.20e-29 | 1 |
ectomeninx | 4.20e-29 | 1 |
future dura mater | 4.20e-29 | 1 |
neural tissue | 1.33e-15 | 2 |
multi cell component structure | 1.33e-15 | 2 |
neuron projection bundle | 1.33e-15 | 2 |
meninx | 2.74e-15 | 2 |
membrane organ | 2.74e-15 | 2 |
meningeal cluster | 2.74e-15 | 2 |
layer of retina | 1.82e-08 | 4 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |