FFCP PHASE1:Hg19::chr22:43015486..43015596,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:43015486..43015596,- | |||
|coexpression_cluster_id=C4105 | |||
|description=CAGE_peak_at_chr22:43015486..43015596,- | |||
|id=chr22:43015486..43015596,- | |||
|ontology_enrichment_celltype=CL:0000055!2.40e-14!180;CL:0000057!2.06e-11!75;CL:0000222!1.56e-08!119;CL:0000136!5.96e-08!15;CL:0002334!2.17e-07!12;CL:0000183!5.04e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.16e-07;12!CL:0000136;1.44e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-11,76;CL:0000222,1.28e-08,121;CL:0000136,4.26e-08,15;CL:0002334,1.59e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.68e-11!659;UBERON:0005256!5.81e-11!143;UBERON:0000055!1.33e-10!69;UBERON:0004872!2.29e-10!84;UBERON:0002049!2.37e-10!79;UBERON:0007798!2.37e-10!79;UBERON:0003914!6.15e-10!118;UBERON:0001981!7.23e-09!60;UBERON:0007500!7.23e-09!60;UBERON:0004537!7.23e-09!60;UBERON:0006965!7.23e-09!60;UBERON:0000467!2.82e-08!625;UBERON:0000480!3.28e-08!626;UBERON:0000914!3.95e-08!83;UBERON:0002329!3.95e-08!83;UBERON:0003077!3.95e-08!83;UBERON:0003059!3.95e-08!83;UBERON:0007282!3.95e-08!83;UBERON:0009618!3.95e-08!83;UBERON:0007285!3.95e-08!83;UBERON:0002100!4.16e-08!216;UBERON:0003102!1.37e-07!95;UBERON:0001637!1.80e-07!42;UBERON:0003509!1.80e-07!42;UBERON:0004572!1.80e-07!42;UBERON:0001009!2.82e-07!113;UBERON:0000926!3.42e-07!448;UBERON:0004120!3.42e-07!448;UBERON:0006603!3.42e-07!448;UBERON:0004290!3.77e-07!70;UBERON:0000475!4.87e-07!365;UBERON:0000477!5.42e-07!286;UBERON:0004535!8.26e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.16e-11,68;UBERON:0004872,1.08e-10,83;UBERON:0003914,1.09e-10,117;UBERON:0003104,1.35e-10,160;UBERON:0009142,1.35e-10,160;UBERON:0002049,2.01e-10,78;UBERON:0007798,2.01e-10,78;UBERON:0005256,5.26e-10,122;UBERON:0000926,2.20e-09,315;UBERON:0004120,2.20e-09,315;UBERON:0006603,2.20e-09,315;UBERON:0007500,5.48e-09,59;UBERON:0001981,5.48e-09,59;UBERON:0004537,5.48e-09,59;UBERON:0006965,5.48e-09,59;UBERON:0007503,8.79e-09,78;UBERON:0001637,9.43e-08,42;UBERON:0003509,9.43e-08,42;UBERON:0004572,9.43e-08,42;UBERON:0003102,1.24e-07,99;UBERON:0001009,2.23e-07,112;UBERON:0007524,2.66e-07,73;UBERON:0003077,3.41e-07,72;UBERON:0007285,3.41e-07,72;UBERON:0002329,5.36e-07,71;UBERON:0003059,5.36e-07,71;UBERON:0007282,5.36e-07,71;UBERON:0004290,5.36e-07,71;UBERON:0009618,5.36e-07,71;UBERON:0002199,6.43e-07,46;UBERON:0002416,6.43e-07,46;UBERON:0004535,6.69e-07,109 | |||
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| |||
|short_description=p@chr22:43015486..43015596,- | |||
}} |
Latest revision as of 21:48, 28 July 2015
Short description: | p@chr22:43015486..43015596, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:43015486..43015596, - |
Coexpression cluster: | C4105_Mesenchymal_Adipocyte_Preadipocyte_leiomyoma_Osteoblast_breast_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-11 | 76 |
mesodermal cell | 1.28e-08 | 121 |
fat cell | 4.26e-08 | 15 |
preadipocyte | 1.59e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
vessel | 9.16e-11 | 68 |
splanchnic layer of lateral plate mesoderm | 1.08e-10 | 83 |
epithelial tube | 1.09e-10 | 117 |
mesenchyme | 1.35e-10 | 160 |
entire embryonic mesenchyme | 1.35e-10 | 160 |
vasculature | 2.01e-10 | 78 |
vascular system | 2.01e-10 | 78 |
trunk mesenchyme | 5.26e-10 | 122 |
mesoderm | 2.20e-09 | 315 |
mesoderm-derived structure | 2.20e-09 | 315 |
presumptive mesoderm | 2.20e-09 | 315 |
epithelial tube open at both ends | 5.48e-09 | 59 |
blood vessel | 5.48e-09 | 59 |
blood vasculature | 5.48e-09 | 59 |
vascular cord | 5.48e-09 | 59 |
epithelial vesicle | 8.79e-09 | 78 |
artery | 9.43e-08 | 42 |
arterial blood vessel | 9.43e-08 | 42 |
arterial system | 9.43e-08 | 42 |
surface structure | 1.24e-07 | 99 |
circulatory system | 2.23e-07 | 112 |
dense mesenchyme tissue | 2.66e-07 | 73 |
paraxial mesoderm | 3.41e-07 | 72 |
presumptive paraxial mesoderm | 3.41e-07 | 72 |
somite | 5.36e-07 | 71 |
presomitic mesoderm | 5.36e-07 | 71 |
presumptive segmental plate | 5.36e-07 | 71 |
dermomyotome | 5.36e-07 | 71 |
trunk paraxial mesoderm | 5.36e-07 | 71 |
integument | 6.43e-07 | 46 |
integumental system | 6.43e-07 | 46 |
cardiovascular system | 6.69e-07 | 109 |