FFCP PHASE1:Hg19::chr22:38370123..38370134,-: Difference between revisions
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|id=chr22:38370123..38370134,-
|short_description=p@chr22:38370123..38370134,-
|description=CAGE_peak_at_chr22:38370123..38370134,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:38370123..38370134,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr22:38370123..38370134,- | |||
|id=chr22:38370123..38370134,- | |||
|ontology_enrichment_celltype=CL:0000148!3.96e-19!10;CL:0000541!3.96e-19!10;CL:0000147!2.33e-13!14;CL:0000710!4.94e-09!20 | |||
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|ontology_enrichment_celltype_v019_2=CL:0000148,1.13e-49,10;CL:0000541,1.13e-49,10;CL:0000147,1.36e-35,14;CL:0002567,1.59e-27,3;CL:0000710,5.16e-25,20;CL:0002566,9.43e-21,1;CL:0000075,1.35e-18,27;CL:0002077,8.29e-15,34;CL:0000333,9.69e-12,41;CL:0000133,2.66e-08,59;CL:0000221,7.52e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.66e-21;1 | |||
|ontology_enrichment_disease=DOID:1909!8.19e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr22:38370123..38370134,- | |||
}} | }} |
Latest revision as of 21:07, 28 July 2015
Short description: | p@chr22:38370123..38370134, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38370123..38370134, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.13e-49 | 10 |
melanoblast | 1.13e-49 | 10 |
pigment cell | 1.36e-35 | 14 |
light melanocyte | 1.59e-27 | 3 |
neurecto-epithelial cell | 5.16e-25 | 20 |
dark melanocyte | 9.43e-21 | 1 |
columnar/cuboidal epithelial cell | 1.35e-18 | 27 |
ecto-epithelial cell | 8.29e-15 | 34 |
migratory neural crest cell | 9.69e-12 | 41 |
neurectodermal cell | 2.66e-08 | 59 |
ectodermal cell | 7.52e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.82e-21 | 1 |
central nervous system cell part cluster | 2.82e-21 | 1 |
axon tract | 2.82e-21 | 1 |
intercerebral commissure | 2.82e-21 | 1 |
dorsal telencephalic commissure | 2.82e-21 | 1 |
brain white matter | 2.82e-21 | 1 |
brain commissure | 2.82e-21 | 1 |
white matter | 2.82e-21 | 1 |
nervous system commissure | 2.82e-21 | 1 |
cerebral hemisphere white matter | 2.82e-21 | 1 |
substantia nigra | 4.22e-21 | 1 |
midbrain nucleus | 4.22e-21 | 1 |
regional part of midbrain | 4.22e-21 | 1 |
midbrain | 4.22e-21 | 1 |
presumptive midbrain | 4.22e-21 | 1 |
midbrain neural tube | 4.22e-21 | 1 |
parotid gland | 6.31e-21 | 1 |
cheek | 6.31e-21 | 1 |
parotid gland primordium | 6.31e-21 | 1 |
multi cell component structure | 2.47e-11 | 2 |
neuron projection bundle | 2.47e-11 | 2 |
major salivary gland | 3.70e-11 | 2 |
midface | 3.70e-11 | 2 |
dorsal plus ventral thalamus | 4.09e-11 | 2 |
thalamic complex | 4.09e-11 | 2 |
medulla oblongata | 6.78e-08 | 3 |
myelencephalon | 6.78e-08 | 3 |
future myelencephalon | 6.78e-08 | 3 |