FFCP PHASE1:Hg19::chr22:37557889..37557903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:37557889..37557903,+ | |||
|description=CAGE_peak_at_chr22:37557889..37557903,+ | |||
|id=chr22:37557889..37557903,+ | |||
|ontology_enrichment_celltype=CL:0000080!7.87e-16!6;CL:0002127!1.97e-11!1;CL:0000914!1.97e-11!1;CL:0000911!1.97e-11!1;CL:0000814!1.97e-11!1;CL:0002042!1.97e-11!1;CL:0002039!1.97e-11!1;CL:0002040!1.97e-11!1;CL:0002041!1.97e-11!1;CL:0000838!2.50e-11!52;CL:0000542!4.27e-11!53;CL:0000051!4.27e-11!53;CL:0000084!6.16e-10!25;CL:0000827!6.16e-10!25 | |||
|ontology_enrichment_celltype_v019=CL:0000322;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.09e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.37e-16!10;DOID:2355!8.62e-12!1;DOID:0060060!3.28e-11!1;DOID:0060061!3.28e-11!1;DOID:8691!3.28e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;7.48e-30;1!DOID:0060058;3.03e-26;10!DOID:74;1.15e-15;2!DOID:3910;2.05e-15;2!DOID:1287;1.70e-08;4!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.48e-30,1;DOID:0060058,3.03e-26,10;DOID:74,1.15e-15,2;DOID:3910,2.37e-15,2;DOID:1287,1.70e-08,4;DOID:3908,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002331!1.01e-09!10;UBERON:0000358!1.01e-09!10;UBERON:0000307!1.01e-09!10;UBERON:0000091!1.01e-09!10;UBERON:0000087!1.01e-09!10;UBERON:0007806!1.01e-09!10;UBERON:0008780!1.01e-09!10;UBERON:0005728!1.01e-09!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0002331;2.81e-12;10!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0000178;1.65e-08;15!UBERON:0000179;1.65e-08;15!UBERON:0000463;1.65e-08;15!UBERON:0009856;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.37e-15,2;UBERON:0002173,2.37e-15,2;UBERON:0002186,2.37e-15,2;UBERON:0002331,2.98e-12,10;UBERON:0000358,2.98e-12,10;UBERON:0000307,2.98e-12,10;UBERON:0000091,2.98e-12,10;UBERON:0000087,2.98e-12,10;UBERON:0007010,2.98e-12,10;UBERON:0007806,2.98e-12,10;UBERON:0008780,2.98e-12,10;UBERON:0005728,2.98e-12,10;UBERON:0004821,1.09e-10,3;UBERON:0003215,1.09e-10,3;UBERON:0010368,1.09e-10,3;UBERON:0009911,1.09e-10,3;UBERON:0002299,1.09e-10,3;UBERON:0006524,1.09e-10,3;UBERON:0008874,1.09e-10,3;UBERON:0002169,1.09e-10,3;UBERON:0004894,1.09e-10,3;UBERON:0000178,1.71e-08,15;UBERON:0000179,1.71e-08,15;UBERON:0000463,1.71e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,2.30725423917463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,1.60633120630454,1.04421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40301326742079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7785046870815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:37557889..37557903,+ | |||
}} |
Latest revision as of 20:54, 28 July 2015
Short description: | p@chr22:37557889..37557903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37557889..37557903, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.37e-15 | 2 |
alveolar duct | 2.37e-15 | 2 |
bronchiole | 2.37e-15 | 2 |
umbilical cord | 2.98e-12 | 10 |
blastocyst | 2.98e-12 | 10 |
blastula | 2.98e-12 | 10 |
bilaminar disc | 2.98e-12 | 10 |
inner cell mass | 2.98e-12 | 10 |
cleaving embryo | 2.98e-12 | 10 |
connecting stalk | 2.98e-12 | 10 |
inner cell mass derived epiblast | 2.98e-12 | 10 |
extraembryonic mesoderm | 2.98e-12 | 10 |
pulmonary alveolus epithelium | 1.09e-10 | 3 |
alveolus | 1.09e-10 | 3 |
pulmonary lobule | 1.09e-10 | 3 |
lobule | 1.09e-10 | 3 |
alveolus of lung | 1.09e-10 | 3 |
alveolar system | 1.09e-10 | 3 |
pulmonary acinus | 1.09e-10 | 3 |
alveolar sac | 1.09e-10 | 3 |
alveolar wall | 1.09e-10 | 3 |
blood | 1.71e-08 | 15 |
haemolymphatic fluid | 1.71e-08 | 15 |
organism substance | 1.71e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.48e-30 | 1 |
lymphoma | 3.03e-26 | 10 |
hematopoietic system disease | 1.15e-15 | 2 |
lung adenocarcinoma | 2.37e-15 | 2 |
cardiovascular system disease | 1.70e-08 | 4 |
non-small cell lung carcinoma | 6.39e-07 | 5 |