FFCP PHASE1:Hg19::chr22:37524793..37524805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:37524793..37524805,- | |||
|coexpression_cluster_id=C2644 | |||
|description=CAGE_peak_at_chr22:37524793..37524805,- | |||
|id=chr22:37524793..37524805,- | |||
|ontology_enrichment_celltype=CL:0000838!2.40e-35!52;CL:0000542!1.61e-34!53;CL:0000051!1.61e-34!53;CL:0000084!3.57e-29!25;CL:0000827!3.57e-29!25;CL:0000791!1.28e-24!18;CL:0000789!1.28e-24!18;CL:0002420!1.28e-24!18;CL:0002419!1.28e-24!18;CL:0000790!1.28e-24!18;CL:0000738!1.20e-20!140;CL:0002087!6.06e-19!119;CL:0000625!6.09e-18!11;CL:0000080!1.41e-16!6;CL:0000988!1.45e-16!182;CL:0000037!8.10e-15!172;CL:0000566!8.10e-15!172;CL:0002031!3.89e-14!124;CL:0002032!6.71e-12!165;CL:0000837!6.71e-12!165;CL:0000623!1.37e-09!3;CL:0000825!1.37e-09!3;CL:0000842!6.80e-09!3;CL:0000767!1.31e-08!3;CL:0000224!9.53e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.38e-24;3!CL:0000226;4.65e-11;3!CL:0000842;4.65e-11;3!CL:0000542;2.42e-10;53!CL:0000946;6.46e-09;1!CL:0000786;6.46e-09;1!CL:0000084;1.20e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.44e-24,3;CL:0000825,2.44e-24,3;CL:0000838,1.55e-19,52;CL:0000542,3.97e-19,53;CL:0000051,3.97e-19,53;CL:0002087,2.71e-12,115;CL:0000988,2.90e-12,177;CL:0000738,1.58e-11,136;CL:0000226,4.90e-11,3;CL:0000842,4.90e-11,3;CL:0000946,8.49e-09,1;CL:0000786,8.49e-09,1;CL:0000980,8.49e-09,1;CL:0000037,8.79e-09,168;CL:0002031,1.50e-08,120;CL:0000084,1.29e-07,25;CL:0000827,1.29e-07,25;CL:0002032,7.37e-07,161;CL:0000837,7.37e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.42e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.33e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.50e-09;1!DOID:0060061;2.50e-09;1!DOID:8691;2.50e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.60e-09,1;DOID:0060061,2.60e-09,1;DOID:8691,2.60e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.48e-16!15;UBERON:0000179!1.48e-16!15;UBERON:0000463!1.48e-16!15;UBERON:0004177!1.25e-11!7;UBERON:0002106!7.91e-08!3;UBERON:0004854!7.91e-08!3;UBERON:0009034!7.91e-08!3;UBERON:0002095!7.91e-08!3;UBERON:0004782!7.91e-08!3;UBERON:0003281!7.91e-08!3;UBERON:0009664!7.91e-08!3;UBERON:0002296!7.91e-08!3;UBERON:0005602!7.91e-08!3;UBERON:0001179!7.91e-08!3;UBERON:0006293!7.91e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.66e-18;15!UBERON:0000179;7.66e-18;15!UBERON:0000463;7.66e-18;15!UBERON:0002390;3.46e-08;32!UBERON:0002331;1.77e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.92e-18,15;UBERON:0000179,8.92e-18,15;UBERON:0000463,8.92e-18,15;UBERON:0002331,1.68e-07,10;UBERON:0000358,1.68e-07,10;UBERON:0000307,1.68e-07,10;UBERON:0000091,1.68e-07,10;UBERON:0000087,1.68e-07,10;UBERON:0007010,1.68e-07,10;UBERON:0007806,1.68e-07,10;UBERON:0008780,1.68e-07,10;UBERON:0005728,1.68e-07,10 | |||
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| ||
|short_description=p@chr22:37524793..37524805,- | |||
}} | }} |
Latest revision as of 20:53, 28 July 2015
Short description: | p@chr22:37524793..37524805, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37524793..37524805, - |
Coexpression cluster: | C2644_mycosis_Natural_hairy_cord_anaplastic_CD4_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.44e-24 | 3 |
pro-NK cell | 2.44e-24 | 3 |
lymphoid lineage restricted progenitor cell | 1.55e-19 | 52 |
lymphocyte | 3.97e-19 | 53 |
common lymphoid progenitor | 3.97e-19 | 53 |
nongranular leukocyte | 2.71e-12 | 115 |
hematopoietic cell | 2.90e-12 | 177 |
leukocyte | 1.58e-11 | 136 |
single nucleate cell | 4.90e-11 | 3 |
mononuclear cell | 4.90e-11 | 3 |
antibody secreting cell | 8.49e-09 | 1 |
plasma cell | 8.49e-09 | 1 |
plasmablast | 8.49e-09 | 1 |
hematopoietic stem cell | 8.79e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 1.50e-08 | 120 |
T cell | 1.29e-07 | 25 |
pro-T cell | 1.29e-07 | 25 |
hematopoietic oligopotent progenitor cell | 7.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.37e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 8.92e-18 | 15 |
haemolymphatic fluid | 8.92e-18 | 15 |
organism substance | 8.92e-18 | 15 |
umbilical cord | 1.68e-07 | 10 |
blastocyst | 1.68e-07 | 10 |
blastula | 1.68e-07 | 10 |
bilaminar disc | 1.68e-07 | 10 |
inner cell mass | 1.68e-07 | 10 |
cleaving embryo | 1.68e-07 | 10 |
connecting stalk | 1.68e-07 | 10 |
inner cell mass derived epiblast | 1.68e-07 | 10 |
extraembryonic mesoderm | 1.68e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.60e-09 | 1 |
cutaneous T cell lymphoma | 2.60e-09 | 1 |
mycosis fungoides | 2.60e-09 | 1 |