FFCP PHASE1:Hg19::chr22:36760442..36760471,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:36760442..36760471,- to FFCP PHASE1:Hg19::chr22:36760442..36760471,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:36760442..36760471,- | |||
|description=CAGE_peak_at_chr22:36760442..36760471,- | |||
|id=chr22:36760442..36760471,- | |||
|ontology_enrichment_celltype=CL:0000359!1.19e-17!32;CL:0000055!1.49e-17!180;CL:0000192!2.52e-17!42;CL:0000514!2.52e-17!42;CL:0000187!1.59e-14!54;CL:0000680!4.99e-14!57;CL:0000056!4.99e-14!57;CL:0000355!4.99e-14!57;CL:0000183!2.96e-13!59;CL:0000393!5.96e-12!60;CL:0000211!5.96e-12!60;CL:0000057!1.48e-08!75;CL:0002334!8.42e-08!12;CL:0002595!7.51e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.78e-33;32!CL:0000192;2.22e-22;43!CL:0002594;2.75e-14;4!CL:0000187;6.11e-12;55!CL:0000393;1.09e-11;61!CL:0000211;1.09e-11;61!CL:0002595;1.32e-10;5!CL:0002592;2.74e-10;3!CL:0002494;9.38e-09;16!CL:0002589;8.94e-08;2!CL:0002596;2.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.55e-36,32;CL:0000192,8.77e-31,43;CL:0000514,8.77e-31,43;CL:0000187,9.50e-23,55;CL:0000680,2.90e-21,58;CL:0000056,2.90e-21,58;CL:0000355,2.90e-21,58;CL:0000393,6.31e-20,61;CL:0000211,6.31e-20,61;CL:0002594,2.82e-14,4;CL:0000048,4.89e-11,427;CL:0002595,9.51e-11,5;CL:0000723,1.05e-10,433;CL:0002592,2.47e-10,3;CL:0000034,2.81e-10,441;CL:0000222,4.85e-09,121;CL:0002494,1.01e-08,16;CL:0000057,2.85e-08,76;CL:0002589,8.14e-08,2;CL:0002596,2.68e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.22e-22;43!CL:0000355;1.08e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!3.15e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.26e-17;14!DOID:120;3.84e-08;27!DOID:193;1.84e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.44e-17,14;DOID:120,3.10e-08,27;DOID:193,1.51e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.66e-20!42;UBERON:0003509!4.66e-20!42;UBERON:0004572!4.66e-20!42;UBERON:0004573!6.61e-17!33;UBERON:0004571!6.61e-17!33;UBERON:0004872!7.35e-16!84;UBERON:0001981!8.78e-16!60;UBERON:0007500!8.78e-16!60;UBERON:0004537!8.78e-16!60;UBERON:0006965!8.78e-16!60;UBERON:0002385!2.40e-14!63;UBERON:0001015!2.40e-14!63;UBERON:0000383!2.40e-14!63;UBERON:0001134!2.31e-13!61;UBERON:0002036!2.31e-13!61;UBERON:0003082!2.31e-13!61;UBERON:0000055!4.13e-12!69;UBERON:0003914!7.45e-12!118;UBERON:0002049!2.32e-10!79;UBERON:0007798!2.32e-10!79;UBERON:0004290!3.44e-10!70;UBERON:0000914!3.56e-09!83;UBERON:0002329!3.56e-09!83;UBERON:0003077!3.56e-09!83;UBERON:0003059!3.56e-09!83;UBERON:0007282!3.56e-09!83;UBERON:0009618!3.56e-09!83;UBERON:0007285!3.56e-09!83;UBERON:0001009!6.40e-09!113;UBERON:0005256!1.91e-08!143;UBERON:0004535!2.98e-08!110;UBERON:0000025!6.93e-08!194;UBERON:0000486!8.86e-08!82;UBERON:0003513!1.23e-07!8;UBERON:0000475!5.29e-07!365;UBERON:0007100!6.04e-07!27;UBERON:0003834!7.51e-07!5;UBERON:0001533!7.51e-07!5;UBERON:0004111!9.65e-07!241;UBERON:0002118!9.69e-07!5;UBERON:0004532!9.69e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.97e-20;33!UBERON:0004571;5.97e-20;33!UBERON:0001637;1.45e-19;42!UBERON:0003509;1.45e-19;42!UBERON:0004572;1.45e-19;42!UBERON:0001310;2.75e-14;4!UBERON:0007500;2.42e-12;56!UBERON:0001981;2.42e-12;56!UBERON:0004537;2.42e-12;56!UBERON:0000992;1.68e-11;13!UBERON:0003513;3.33e-11;7!UBERON:0002118;5.15e-11;5!UBERON:0003834;1.32e-10;5!UBERON:0001533;1.32e-10;5!UBERON:0003498;2.74e-10;3!UBERON:0005985;2.74e-10;3!UBERON:0001621;2.74e-10;3!UBERON:0000055;1.18e-08;65!UBERON:0007100;1.91e-08;25!UBERON:0002049;3.72e-08;75!UBERON:0007798;3.72e-08;75!UBERON:0000948;8.02e-08;22!UBERON:0002119;8.25e-08;4!UBERON:0001529;8.94e-08;2!UBERON:0007204;8.94e-08;2!UBERON:0005396;2.17e-07;2!UBERON:0003914;2.55e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.70e-31,42;UBERON:0003509,1.70e-31,42;UBERON:0004572,1.70e-31,42;UBERON:0004573,1.42e-23,33;UBERON:0004571,1.42e-23,33;UBERON:0007500,9.35e-23,59;UBERON:0001981,9.35e-23,59;UBERON:0004537,9.35e-23,59;UBERON:0006965,9.35e-23,59;UBERON:0004872,9.48e-23,83;UBERON:0001134,1.65e-19,62;UBERON:0002036,1.65e-19,62;UBERON:0003082,1.65e-19,62;UBERON:0000055,6.31e-19,68;UBERON:0002385,1.02e-18,64;UBERON:0001015,1.02e-18,64;UBERON:0000383,1.02e-18,64;UBERON:0002329,2.69e-16,71;UBERON:0003059,2.69e-16,71;UBERON:0007282,2.69e-16,71;UBERON:0004290,2.69e-16,71;UBERON:0009618,2.69e-16,71;UBERON:0001009,3.03e-16,112;UBERON:0003077,5.45e-16,72;UBERON:0007285,5.45e-16,72;UBERON:0002049,1.01e-15,78;UBERON:0007798,1.01e-15,78;UBERON:0007524,1.08e-15,73;UBERON:0004535,1.46e-15,109;UBERON:0003914,2.26e-15,117;UBERON:0007503,2.56e-14,78;UBERON:0001310,2.82e-14,4;UBERON:0000486,4.08e-13,83;UBERON:0000992,1.34e-11,13;UBERON:0003513,2.53e-11,7;UBERON:0002118,4.69e-11,5;UBERON:0003834,9.51e-11,5;UBERON:0001533,9.51e-11,5;UBERON:0003498,1.42e-10,5;UBERON:0005985,1.42e-10,5;UBERON:0001621,2.47e-10,3;UBERON:0007100,1.26e-09,27;UBERON:0005256,4.92e-09,122;UBERON:0000948,5.09e-09,24;UBERON:0005498,5.09e-09,24;UBERON:0004140,5.09e-09,24;UBERON:0009881,5.09e-09,24;UBERON:0004141,5.09e-09,24;UBERON:0003084,5.09e-09,24;UBERON:0007005,5.09e-09,24;UBERON:0004139,5.09e-09,24;UBERON:0004291,5.09e-09,24;UBERON:0000926,1.28e-08,315;UBERON:0004120,1.28e-08,315;UBERON:0006603,1.28e-08,315;UBERON:0002119,6.49e-08,4;UBERON:0001529,8.14e-08,2;UBERON:0007204,8.14e-08,2;UBERON:0003081,1.09e-07,203;UBERON:0005396,2.68e-07,2;UBERON:0002204,6.64e-07,167;UBERON:0000991,9.33e-07,21;UBERON:0009196,9.33e-07,21;UBERON:0009117,9.33e-07,21;UBERON:0005564,9.33e-07,21 | |||
|phase1_expression=0,0.214100523890983,0.845726424575827,0,0,0,0,0,0,0.982935746006035,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,2.98183171017191,0.506522046658319,0.264818361626438,0.286836620748814,1.06400514659507,0,2.1349799145941,1.48000529050296,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,1.31693286264251,1.5324389789951,1.65261864797256,0.113432183160021,1.07633781413317,0,0.423863802319124,0.300091096084402,0,0.515281080091258,0.744467425326359,1.18143432568886,1.07180705677318,0.504867548488229,0.184099797284599,0,1.06502877754984,0.705264687593482,1.52604533079439,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,1.06375246633948,2.08014873822732,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0.737476674166813,0,0,0,0,0,0,0,0,0,0.496215615637554,1.84154367945675,0.841980283299221,0.128139149255701,2.55853624533352,1.60853921143608,0,1.23367755042124,0,0.739144404124282,2.07701771673448,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,1.72279661398852,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,1.39453664789186,1.88887408098384,0.6970372701606,0.924100740528266,3.19383618190213,2.60979897622522,4.81842969670192,3.57812216854978,0,0,0,0.255897791311334,0,1.27281299170375,6.27958912159384,0,0.274537029736055,0,5.45892700247953,1.58510321173008,2.10629228119491,0,0.974853958525138,4.22600587027022,1.50149902548784,0.141405431953713,2.26016233240486,3.30819206127675,2.65375590096488,1.75380354101505,0,0,7.71059432458275,7.12594045629425,4.7888252430481,0,0,7.49009208110625,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,0.276283915531148,0,0.613612095012929,0,0.622079175323615,0,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0.717873024576814,1.39775300349294,0,0.446342914883745,1.94832070211506,12.9707958075265,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.104909176269996,0.316801009558219,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,26.0693673331695,0,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,1.79105763464249,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0.151230923763239,1.24349760466224,4.28779934969938,3.82312241192886,0,3.10525913752519,1.65882483136342,1.59505028734797,7.82617592717601,0.300515217994437,0,2.84809513243263,9.09243296012797,0.322231671127465,2.32016879939247,4.37905477568478,0.400027764663154,0.686791410365586,0.336749488765919,1.26184898228651,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0,0,0,1.86919826156599,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0.1433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| ||
|short_description=p@chr22:36760442..36760471,- | |||
}} | }} |
Latest revision as of 20:46, 28 July 2015
Short description: | p@chr22:36760442..36760471, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:36760442..36760471, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.55e-36 | 32 |
smooth muscle cell | 8.77e-31 | 43 |
smooth muscle myoblast | 8.77e-31 | 43 |
muscle cell | 9.50e-23 | 55 |
muscle precursor cell | 2.90e-21 | 58 |
myoblast | 2.90e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-21 | 58 |
electrically responsive cell | 6.31e-20 | 61 |
electrically active cell | 6.31e-20 | 61 |
smooth muscle cell of the umbilical artery | 2.82e-14 | 4 |
multi fate stem cell | 4.89e-11 | 427 |
smooth muscle cell of the subclavian artery | 9.51e-11 | 5 |
somatic stem cell | 1.05e-10 | 433 |
smooth muscle cell of the coronary artery | 2.47e-10 | 3 |
stem cell | 2.81e-10 | 441 |
mesodermal cell | 4.85e-09 | 121 |
cardiocyte | 1.01e-08 | 16 |
fibroblast | 2.85e-08 | 76 |
smooth muscle cell of the brachiocephalic vasculature | 8.14e-08 | 2 |
smooth muscle cell of the carotid artery | 2.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.44e-17 | 14 |
female reproductive organ cancer | 3.10e-08 | 27 |
reproductive organ cancer | 1.51e-07 | 29 |