FFCP PHASE1:Hg19::chr22:30606550..30606556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:30606550..30606556,+ | |||
|description=CAGE_peak_at_chr22:30606550..30606556,+ | |description=CAGE_peak_at_chr22:30606550..30606556,+ | ||
|id=chr22:30606550..30606556,+ | |id=chr22:30606550..30606556,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.34e-13!42;CL:0000548!9.22e-13!679;CL:0000004!9.22e-13!679;CL:0000255!9.22e-13!679;CL:0000860!1.35e-12!45;CL:0000012!1.51e-12!682;CL:0000003!7.75e-10!722;CL:0000144!2.52e-08!625;CL:0002371!4.23e-08!591;CL:0000839!4.04e-07!70;CL:0000557!6.24e-07!71;CL:0002194!6.35e-07!63;CL:0000576!6.35e-07!63;CL:0000040!6.35e-07!63;CL:0000559!6.35e-07!63;CL:0000243!6.82e-07!15;CL:0000125!6.82e-07!15;CL:0000030!6.82e-07!15;CL:0000339!6.82e-07!15 | |ontology_enrichment_celltype=CL:0002057!7.34e-13!42;CL:0000548!9.22e-13!679;CL:0000004!9.22e-13!679;CL:0000255!9.22e-13!679;CL:0000860!1.35e-12!45;CL:0000012!1.51e-12!682;CL:0000003!7.75e-10!722;CL:0000144!2.52e-08!625;CL:0002371!4.23e-08!591;CL:0000839!4.04e-07!70;CL:0000557!6.24e-07!71;CL:0002194!6.35e-07!63;CL:0000576!6.35e-07!63;CL:0000040!6.35e-07!63;CL:0000559!6.35e-07!63;CL:0000243!6.82e-07!15;CL:0000125!6.82e-07!15;CL:0000030!6.82e-07!15;CL:0000339!6.82e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.94e-16;33!CL:0002057;2.94e-16;33!CL:0000473;1.70e-12;39!CL:0000234;1.70e-12;39!CL:1000449;1.47e-07;15!CL:0000576;2.57e-07;48!CL:1000497;9.97e-07;17!CL:0002518;9.97e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.61e-13,42;CL:0002057,2.61e-13,42;CL:0000473,1.43e-11,48;CL:0000234,1.43e-11,48;CL:0002194,3.97e-09,59;CL:0000576,3.97e-09,59;CL:0000040,3.97e-09,59;CL:0000559,3.97e-09,59;CL:0002009,8.20e-09,61;CL:0000839,4.18e-08,66;CL:0000557,5.62e-08,67;CL:1000449,1.53e-07,15;CL:0000766,2.20e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;6.35e-09;42 | |||
|ontology_enrichment_disease=DOID:120!7.88e-09!27;DOID:193!5.97e-08!29;DOID:2394!2.12e-07!14;DOID:3908!7.36e-07!5 | |ontology_enrichment_disease=DOID:120!7.88e-09!27;DOID:193!5.97e-08!29;DOID:2394!2.12e-07!14;DOID:3908!7.36e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3910;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.60e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.43e-08!11;UBERON:0000923!9.62e-07!604;UBERON:0005291!9.62e-07!604;UBERON:0006598!9.62e-07!604;UBERON:0002532!9.62e-07!604 | |ontology_enrichment_uberon=UBERON:0007625!4.43e-08!11;UBERON:0000923!9.62e-07!604;UBERON:0005291!9.62e-07!604;UBERON:0006598!9.62e-07!604;UBERON:0002532!9.62e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.03e-10;11!UBERON:0006555;1.47e-07;15!UBERON:0004819;1.47e-07;15!UBERON:0001285;1.47e-07;15!UBERON:0007684;1.47e-07;15!UBERON:0004903;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.43e-10,11;UBERON:0002371,4.59e-09,76;UBERON:0001474,2.41e-08,82;UBERON:0004211,1.53e-07,15;UBERON:0009773,1.53e-07,15;UBERON:0001231,1.53e-07,15;UBERON:0001285,1.53e-07,15;UBERON:0007684,1.53e-07,15;UBERON:0004208,1.53e-07,15;UBERON:0004765,1.57e-07,90;UBERON:0002405,2.92e-07,93;UBERON:0006555,4.23e-07,16;UBERON:0004819,4.23e-07,16;UBERON:0004903,5.60e-07,2;UBERON:0002173,5.60e-07,2;UBERON:0002186,5.60e-07,2;UBERON:0002390,7.56e-07,98;UBERON:0003061,7.56e-07,98 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.697287110717054,0.411167888021826,0.929119112685311,1.43846196161075,0.512321413058201,0.47296445977717,3.10271112662957,4.51839278508678,4.06279459783025,0.188242339542605,0.545812300115692,0,1.83650335422542,0.641858054152187,0.639337125799041,0,0,0,0.870627715885752,1.70215567407342,1.86846674698672,0.251248665256743,0.521482918420201,0.434377689410233,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,1.33037638477538,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0.65147236858747,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.813472649219715,0,0,0,0,0,0,0,0.539107359730903,0,1.46139224653261,0,0,0,0,0,0.541892875087706,0,1.01950509218015,0,0.671624264166535,0,0,1.02580050046556,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0.430234056612155,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.261177619741208,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0.298509605773748,0.233713309847224,0.554805861502613,3.21985108967651,0,0,0.686520205190771,0.756154618816195,0.15543720058278,0.295710299979268,0.63718706865481,0,0.310525913752519,0.414706207840855,0.797525143673985,0.521745061811734,0.751288044986092,0,1.22061219961398,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.71635536432595,0,0,0.176689145945881,0.38582807654183,0,0.512483037175893,0,0,0,0,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.685952037749674,0,0,0.354581522651905,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.9164274741762,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962896400270019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.697287110717054,0.411167888021826,0.929119112685311,1.43846196161075,0.512321413058201,0.47296445977717,3.10271112662957,4.51839278508678,4.06279459783025,0.188242339542605,0.545812300115692,0,1.83650335422542,0.641858054152187,0.639337125799041,0,0,0,0.870627715885752,1.70215567407342,1.86846674698672,0.251248665256743,0.521482918420201,0.434377689410233,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,1.33037638477538,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0.65147236858747,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.813472649219715,0,0,0,0,0,0,0,0.539107359730903,0,1.46139224653261,0,0,0,0,0,0.541892875087706,0,1.01950509218015,0,0.671624264166535,0,0,1.02580050046556,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0.430234056612155,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.261177619741208,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0.298509605773748,0.233713309847224,0.554805861502613,3.21985108967651,0,0,0.686520205190771,0.756154618816195,0.15543720058278,0.295710299979268,0.63718706865481,0,0.310525913752519,0.414706207840855,0.797525143673985,0.521745061811734,0.751288044986092,0,1.22061219961398,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.71635536432595,0,0,0.176689145945881,0.38582807654183,0,0.512483037175893,0,0,0,0,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.685952037749674,0,0,0.354581522651905,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.9164274741762,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962896400270019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:30606550..30606556,+ | |short_description=p@chr22:30606550..30606556,+ | ||
}} | }} |
Latest revision as of 20:03, 28 July 2015
Short description: | p@chr22:30606550..30606556, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30606550..30606556, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.61e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.61e-13 | 42 |
defensive cell | 1.43e-11 | 48 |
phagocyte | 1.43e-11 | 48 |
monopoietic cell | 3.97e-09 | 59 |
monocyte | 3.97e-09 | 59 |
monoblast | 3.97e-09 | 59 |
promonocyte | 3.97e-09 | 59 |
macrophage dendritic cell progenitor | 8.20e-09 | 61 |
myeloid lineage restricted progenitor cell | 4.18e-08 | 66 |
granulocyte monocyte progenitor cell | 5.62e-08 | 67 |
epithelial cell of nephron | 1.53e-07 | 15 |
myeloid leukocyte | 2.20e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.43e-10 | 11 |
bone marrow | 4.59e-09 | 76 |
bone element | 2.41e-08 | 82 |
nephron epithelium | 1.53e-07 | 15 |
renal tubule | 1.53e-07 | 15 |
nephron tubule | 1.53e-07 | 15 |
nephron | 1.53e-07 | 15 |
uriniferous tubule | 1.53e-07 | 15 |
nephrogenic mesenchyme | 1.53e-07 | 15 |
skeletal element | 1.57e-07 | 90 |
immune system | 2.92e-07 | 93 |
excretory tube | 4.23e-07 | 16 |
kidney epithelium | 4.23e-07 | 16 |
bronchoalveolar duct junction | 5.60e-07 | 2 |
alveolar duct | 5.60e-07 | 2 |
bronchiole | 5.60e-07 | 2 |
hematopoietic system | 7.56e-07 | 98 |
blood island | 7.56e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.60e-07 | 2 |