FFCP PHASE1:Hg19::chr22:28901919..28901924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:28901919..28901924,+ | |||
|description=CAGE_peak_at_chr22:28901919..28901924,+ | |description=CAGE_peak_at_chr22:28901919..28901924,+ | ||
|id=chr22:28901919..28901924,+ | |id=chr22:28901919..28901924,+ | ||
|ontology_enrichment_celltype=CL:0002149;1.05e-33;6!CL:0002255;1.05e-33;6!CL:0000313;4.10e-23;1!CL:0000159;2.90e-12;2!CL:0000499;9.00e-08;28 | |ontology_enrichment_celltype=CL:0002149!4.71e-14!6;CL:0002255!4.71e-14!6;CL:0000159!4.49e-11!2;CL:0000064!2.57e-07!3;CL:0005012!2.57e-07!3;CL:0000067!2.57e-07!3;CL:0002304!2.57e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002149;1.05e-33;6!CL:0002255;1.05e-33;6!CL:0000313;4.10e-23;1!CL:0000159;2.90e-12;2!CL:0000499;9.00e-08;28 | ||
|ontology_enrichment_disease=DOID:3001;1.05e-33;6!DOID:2152;4.10e-23;1!DOID:299;3.71e-22;25!DOID:120;1.54e-20;27!DOID:193;3.83e-19;29!DOID:4468;2.90e-12;2!DOID:5409;9.10e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0002149,9.39e-34,6;CL:0002255,9.39e-34,6;CL:0000313,6.40e-23,1;CL:0000159,3.62e-12,2;CL:0000499,8.80e-08,28 | ||
|ontology_enrichment_uberon=UBERON:0004911;4.10e-23;1!UBERON:0000995;2.14e-12;17!UBERON:0004909;2.90e-12;2!UBERON:0003975;9.58e-12;18!UBERON:0000474;2.31e-10;37!UBERON:0003134;3.25e-10;33!UBERON:0004175;3.68e-10;21!UBERON:0003100;6.69e-08;41!UBERON:0003133;7.75e-08;44 | |ontology_enrichment_development_v019=UBERON:0005795;6.77e-10;10 | ||
|ontology_enrichment_disease=DOID:3001!4.71e-14!6;DOID:299!8.73e-12!25;DOID:4468!4.96e-11!2;DOID:120!2.37e-08!27;DOID:193!1.04e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.05e-33;6!DOID:2152;4.10e-23;1!DOID:299;3.71e-22;25!DOID:120;1.54e-20;27!DOID:193;3.83e-19;29!DOID:4468;2.90e-12;2!DOID:5409;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.39e-34,6;DOID:2152,6.40e-23,1;DOID:299,3.55e-22,25;DOID:120,1.48e-20,27;DOID:193,3.69e-19,29;DOID:4468,2.32e-12,2;DOID:305,4.87e-10,106;DOID:0050686,1.11e-07,137;DOID:0050687,2.20e-07,143;DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001778!2.57e-07!3;UBERON:0001775!2.57e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.10e-23;1!UBERON:0000995;2.14e-12;17!UBERON:0004909;2.90e-12;2!UBERON:0003975;9.58e-12;18!UBERON:0000474;2.31e-10;37!UBERON:0003134;3.25e-10;33!UBERON:0004175;3.68e-10;21!UBERON:0003100;6.69e-08;41!UBERON:0003133;7.75e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.40e-23,1;UBERON:0004909,3.62e-12,2;UBERON:0000995,3.57e-10,21;UBERON:0003134,6.15e-10,37;UBERON:0000474,6.15e-10,37;UBERON:0005795,9.69e-10,22;UBERON:0003975,9.69e-10,22;UBERON:0003100,5.29e-09,41;UBERON:0004175,1.21e-08,25;UBERON:0003133,9.72e-08,48 | |||
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|short_description=p@chr22:28901919..28901924,+ | |short_description=p@chr22:28901919..28901924,+ | ||
}} | }} |
Latest revision as of 19:53, 28 July 2015
Short description: | p@chr22:28901919..28901924, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:28901919..28901924, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 9.39e-34 | 6 |
stromal cell of endometrium | 9.39e-34 | 6 |
serous secreting cell | 6.40e-23 | 1 |
seromucus secreting cell | 3.62e-12 | 2 |
stromal cell | 8.80e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.40e-23 | 1 |
epithelium of gonad | 3.62e-12 | 2 |
uterus | 3.57e-10 | 21 |
female reproductive organ | 6.15e-10 | 37 |
female reproductive system | 6.15e-10 | 37 |
embryonic uterus | 9.69e-10 | 22 |
internal female genitalia | 9.69e-10 | 22 |
female organism | 5.29e-09 | 41 |
internal genitalia | 1.21e-08 | 25 |
reproductive organ | 9.72e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.39e-34 | 6 |
ovary epithelial cancer | 6.40e-23 | 1 |
adenocarcinoma | 3.55e-22 | 25 |
female reproductive organ cancer | 1.48e-20 | 27 |
reproductive organ cancer | 3.69e-19 | 29 |
clear cell adenocarcinoma | 2.32e-12 | 2 |
carcinoma | 4.87e-10 | 106 |
organ system cancer | 1.11e-07 | 137 |
cell type cancer | 2.20e-07 | 143 |
lung small cell carcinoma | 8.61e-07 | 4 |