FFCP PHASE1:Hg19::chr22:27622736..27622761,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003adh.2_5end | |association_with_transcript=0bp_to_uc003adh.2_5end | ||
|cluster_id=chr22:27622736..27622761,- | |||
|coexpression_cluster_id=C2641 | |coexpression_cluster_id=C2641 | ||
|description=CAGE_peak_2_at_uc003adh.2_5end | |description=CAGE_peak_2_at_uc003adh.2_5end | ||
|id=chr22:27622736..27622761,- | |id=chr22:27622736..27622761,- | ||
|ontology_enrichment_celltype=CL:0000077!1.54e-27!19;CL:0000057!2.13e-11!75;CL:0002334!1.02e-10!12;CL:0000055!1.73e-09!180;CL:0000144!3.74e-09!625;CL:0002620!4.57e-08!23;CL:0000213!8.42e-08!57;CL:0000215!8.42e-08!57;CL:0000548!1.96e-07!679;CL:0000004!1.96e-07!679;CL:0000255!1.96e-07!679;CL:0000012!2.75e-07!682;CL:0000349!4.12e-07!3;CL:0002577!4.12e-07!3;CL:0000174!5.12e-07!3 | |ontology_enrichment_celltype=CL:0000077!1.54e-27!19;CL:0000057!2.13e-11!75;CL:0002334!1.02e-10!12;CL:0000055!1.73e-09!180;CL:0000144!3.74e-09!625;CL:0002620!4.57e-08!23;CL:0000213!8.42e-08!57;CL:0000215!8.42e-08!57;CL:0000548!1.96e-07!679;CL:0000004!1.96e-07!679;CL:0000255!1.96e-07!679;CL:0000012!2.75e-07!682;CL:0000349!4.12e-07!3;CL:0002577!4.12e-07!3;CL:0000174!5.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.04e-45;19!CL:0002097;9.49e-14;2!CL:0000174;1.84e-09;3!CL:0002577;2.18e-09;3!CL:0000511;1.68e-07;1!CL:0002625;1.68e-07;1!CL:0000222;1.68e-07;1!CL:0002581;1.68e-07;1!CL:0000216;1.68e-07;1!CL:0000213;3.93e-07;58!CL:0000215;3.93e-07;58!CL:0000306;4.33e-07;4!CL:0002222;4.33e-07;4!CL:0002224;4.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.54e-46,19;CL:0000213,6.45e-16,58;CL:0000215,6.45e-16,58;CL:0002097,1.35e-13,2;CL:0000076,3.14e-12,63;CL:0002577,1.66e-09,3;CL:0000174,2.33e-09,3;CL:0000511,1.15e-07,1;CL:0002625,1.15e-07,1;CL:0000216,1.15e-07,1;CL:0002581,1.22e-07,1;CL:0000222,1.83e-07,121;CL:0000306,4.34e-07,4;CL:0002222,4.34e-07,4;CL:0002224,4.34e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.86e-10!14 | |ontology_enrichment_disease=DOID:2394!1.86e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.78e-16;14!DOID:120;5.19e-08;27!DOID:193;2.03e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.98e-16,14;DOID:120,5.69e-08,27;DOID:193,2.21e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.67e-09!11;UBERON:0000488!1.31e-07!4 | |ontology_enrichment_uberon=UBERON:0007625!1.67e-09!11;UBERON:0000488!1.31e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;6.16e-12;5!UBERON:0002369;1.84e-09;3!UBERON:0001235;1.84e-09;3!UBERON:0006858;1.84e-09;3!UBERON:0001280;3.53e-09;3!UBERON:0004647;3.53e-09;3!UBERON:0001136;1.68e-07;1!UBERON:0001343;1.68e-07;1!UBERON:0001282;1.68e-07;1!UBERON:0009842;1.68e-07;1!UBERON:0003704;1.68e-07;1!UBERON:0004910;1.68e-07;1!UBERON:0004813;1.68e-07;1!UBERON:0001171;1.68e-07;1!UBERON:0001172;1.68e-07;1!UBERON:0001987;3.03e-07;4!UBERON:0010077;4.33e-07;4!UBERON:0005389;4.33e-07;4!UBERON:0000484;4.33e-07;4!UBERON:0000965;4.33e-07;4!UBERON:0001803;4.33e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,8.18e-12,5;UBERON:0002369,2.33e-09,3;UBERON:0001235,2.33e-09,3;UBERON:0006858,2.33e-09,3;UBERON:0001280,4.35e-09,3;UBERON:0004647,4.35e-09,3;UBERON:0005171,4.35e-09,3;UBERON:0001136,1.15e-07,1;UBERON:0001343,1.15e-07,1;UBERON:0004910,1.15e-07,1;UBERON:0005154,1.15e-07,1;UBERON:0005295,1.15e-07,1;UBERON:0004813,1.15e-07,1;UBERON:0005297,1.15e-07,1;UBERON:0005294,1.15e-07,1;UBERON:0010141,1.15e-07,1;UBERON:0005891,1.15e-07,1;UBERON:0001987,2.47e-07,4;UBERON:0004340,2.47e-07,4;UBERON:0001282,2.63e-07,1;UBERON:0009842,2.63e-07,1;UBERON:0003704,2.63e-07,1;UBERON:0001171,2.63e-07,1;UBERON:0001172,2.63e-07,1;UBERON:0010077,4.34e-07,4;UBERON:0005389,4.34e-07,4;UBERON:0000484,4.34e-07,4;UBERON:0002546,4.34e-07,4;UBERON:0000965,4.34e-07,4;UBERON:0001803,4.34e-07,4;UBERON:0003073,4.34e-07,4;UBERON:0005426,4.34e-07,4 | |||
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| ||
|short_description=p2@uc003adh.2 | |short_description=p2@uc003adh.2 | ||
}} | }} |
Latest revision as of 19:50, 28 July 2015
Short description: | p2@uc003adh.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003adh.2_5end |
Coexpression cluster: | C2641_mesothelioma_pagetoid_Mesothelial_Placental_mesenchymal_astrocytoma_lens |
Association with transcript: | 0bp_to_uc003adh.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.54e-46 | 19 |
lining cell | 6.45e-16 | 58 |
barrier cell | 6.45e-16 | 58 |
cortical cell of adrenal gland | 1.35e-13 | 2 |
squamous epithelial cell | 3.14e-12 | 63 |
placental epithelial cell | 1.66e-09 | 3 |
steroid hormone secreting cell | 2.33e-09 | 3 |
androgen binding protein secreting cell | 1.15e-07 | 1 |
seminiferous tubule epithelial cell | 1.15e-07 | 1 |
Sertoli cell | 1.15e-07 | 1 |
perirenal preadipocyte | 1.22e-07 | 1 |
mesodermal cell | 1.83e-07 | 121 |
crystallin accumulating cell | 4.34e-07 | 4 |
vertebrate lens cell | 4.34e-07 | 4 |
lens epithelial cell | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 8.18e-12 | 5 |
adrenal gland | 2.33e-09 | 3 |
adrenal cortex | 2.33e-09 | 3 |
adrenal/interrenal gland | 2.33e-09 | 3 |
liver parenchyma | 4.35e-09 | 3 |
liver lobule | 4.35e-09 | 3 |
hepatic duct | 4.35e-09 | 3 |
mesothelium | 1.15e-07 | 1 |
seminiferous tubule of testis | 1.15e-07 | 1 |
epithelium of male gonad | 1.15e-07 | 1 |
epithelial cord | 1.15e-07 | 1 |
sex cord | 1.15e-07 | 1 |
seminiferous tubule epithelium | 1.15e-07 | 1 |
testis sex cord | 1.15e-07 | 1 |
genital ridge | 1.15e-07 | 1 |
primitive sex cord of indifferent gonad | 1.15e-07 | 1 |
coelomic epithelium | 1.15e-07 | 1 |
placenta | 2.47e-07 | 4 |
allantois | 2.47e-07 | 4 |
intralobular bile duct | 2.63e-07 | 1 |
acinus | 2.63e-07 | 1 |
intrahepatic bile duct | 2.63e-07 | 1 |
portal lobule | 2.63e-07 | 1 |
hepatic acinus | 2.63e-07 | 1 |
cuboidal epithelium | 4.34e-07 | 4 |
transparent eye structure | 4.34e-07 | 4 |
simple cuboidal epithelium | 4.34e-07 | 4 |
cranial placode | 4.34e-07 | 4 |
lens of camera-type eye | 4.34e-07 | 4 |
epithelium of lens | 4.34e-07 | 4 |
lens placode | 4.34e-07 | 4 |
lens vesicle | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.98e-16 | 14 |
female reproductive organ cancer | 5.69e-08 | 27 |
reproductive organ cancer | 2.21e-07 | 29 |