FFCP PHASE1:Hg19::chr21:44861349..44861354,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:44861349..44861354,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr21:44861349..44861354,+ | |||
|id=chr21:44861349..44861354,+ | |||
|ontology_enrichment_celltype=CL:0002150!9.67e-19!3;CL:0000861!9.67e-19!3;CL:0000066!1.61e-08!254;CL:0000181!1.94e-08!12;CL:0000417!1.94e-08!12;CL:0000668!1.94e-08!12;CL:0000414!1.94e-08!12;CL:0000412!1.94e-08!12;CL:0000182!1.94e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002188;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.22e-09,5;CL:1000746,6.04e-07,7;CL:1000612,6.04e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13 | |||
|ontology_enrichment_disease=DOID:305!4.06e-20!106;DOID:0050687!8.93e-14!143;DOID:162!1.68e-07!235;DOID:14566!2.97e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.11e-41!9;UBERON:0004921!1.74e-23!129;UBERON:0004185!1.74e-23!129;UBERON:0008947!2.29e-23!38;UBERON:0003258!2.29e-23!38;UBERON:0001041!1.96e-22!98;UBERON:0000077!2.20e-19!130;UBERON:0001557!7.73e-19!19;UBERON:0001007!1.01e-18!155;UBERON:0001555!1.01e-18!155;UBERON:0007026!1.01e-18!155;UBERON:0000065!1.02e-18!53;UBERON:0004119!2.16e-18!169;UBERON:0000925!2.16e-18!169;UBERON:0006595!2.16e-18!169;UBERON:0000072!6.26e-16!46;UBERON:0001004!4.91e-13!72;UBERON:0008835!6.06e-13!22;UBERON:0003894!6.06e-13!22;UBERON:0009854!2.43e-12!23;UBERON:0002107!2.79e-11!19;UBERON:0006925!2.79e-11!19;UBERON:0008836!2.79e-11!19;UBERON:0007499!2.79e-11!25;UBERON:0009497!2.79e-11!25;UBERON:0000015!2.79e-11!25;UBERON:0002423!2.79e-11!25;UBERON:0006235!2.79e-11!25;UBERON:0004161!2.79e-11!25;UBERON:0001048!3.01e-11!168;UBERON:0009856!8.23e-11!26;UBERON:0005911!1.13e-09!82;UBERON:0003104!1.82e-09!238;UBERON:0009142!1.82e-09!238;UBERON:0005057!4.44e-08!26;UBERON:0003929!1.36e-07!54;UBERON:0000063!1.41e-07!97;UBERON:0004913!2.37e-07!1;UBERON:0003703!2.37e-07!1;UBERON:0001174!2.37e-07!1;UBERON:0004914!2.37e-07!1;UBERON:0002171!2.52e-07!1;UBERON:0006518!2.52e-07!1;UBERON:0008949!2.52e-07!1;UBERON:0000101!2.52e-07!1;UBERON:0002167!2.52e-07!1;UBERON:0001000!2.67e-07!1;UBERON:0005352!2.67e-07!1;UBERON:0000926!6.37e-07!448;UBERON:0004120!6.37e-07!448;UBERON:0006603!6.37e-07!448;UBERON:0005177!6.40e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.39e-19;19!UBERON:0006925;1.39e-19;19!UBERON:0002423;4.19e-15;25!UBERON:0002365;4.33e-12;31!UBERON:0002330;4.33e-12;31!UBERON:0002368;9.08e-10;33!UBERON:0005172;2.24e-09;52!UBERON:0005173;2.24e-09;52!UBERON:0002417;1.02e-08;58!UBERON:0000916;1.02e-08;58!UBERON:0000949;1.86e-07;43!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.48e-19,19;UBERON:0006925,1.48e-19,19;UBERON:0008836,1.48e-19,19;UBERON:0008835,5.13e-17,22;UBERON:0003894,5.13e-17,22;UBERON:0009854,2.57e-16,23;UBERON:0007499,4.40e-15,25;UBERON:0009497,4.40e-15,25;UBERON:0000015,4.40e-15,25;UBERON:0002423,4.40e-15,25;UBERON:0006235,4.40e-15,25;UBERON:0004161,4.40e-15,25;UBERON:0009856,1.55e-14,26;UBERON:0005172,2.04e-12,54;UBERON:0005173,2.04e-12,54;UBERON:0002365,2.48e-12,31;UBERON:0002330,2.48e-12,31;UBERON:0002417,3.04e-11,60;UBERON:0000916,3.04e-11,60;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0001041,5.87e-08,87;UBERON:0003929,2.08e-07,54;UBERON:0010532,6.04e-07,7;UBERON:0000074,6.04e-07,7;UBERON:0001229,6.04e-07,7;UBERON:0001230,6.04e-07,7;UBERON:0003220,6.04e-07,7;UBERON:0005749,6.04e-07,7;UBERON:0004199,6.04e-07,7;UBERON:0004209,6.04e-07,7;UBERON:0004198,6.04e-07,7;UBERON:0005177,6.30e-07,101;UBERON:0002530,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.661763836394364,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,1.92373578473195,0,0,0,0,0,0,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.580537987734511,0.365446585430928,0.492692742319255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.576911008668165,0.943649613958588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,1.32506888912221,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:44861349..44861354,+ | |||
}} |
Latest revision as of 18:18, 28 July 2015
Short description: | p@chr21:44861349..44861354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44861349..44861354, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.22e-09 | 5 |
glomerular cell | 6.04e-07 | 7 |
kidney corpuscule cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 1.48e-19 | 19 |
digestive gland | 1.48e-19 | 19 |
liver bud | 1.48e-19 | 19 |
hepatic diverticulum | 5.13e-17 | 22 |
liver primordium | 5.13e-17 | 22 |
digestive tract diverticulum | 2.57e-16 | 23 |
epithelial sac | 4.40e-15 | 25 |
epithelium of foregut-midgut junction | 4.40e-15 | 25 |
anatomical boundary | 4.40e-15 | 25 |
hepatobiliary system | 4.40e-15 | 25 |
foregut-midgut junction | 4.40e-15 | 25 |
septum transversum | 4.40e-15 | 25 |
sac | 1.55e-14 | 26 |
abdomen element | 2.04e-12 | 54 |
abdominal segment element | 2.04e-12 | 54 |
exocrine gland | 2.48e-12 | 31 |
exocrine system | 2.48e-12 | 31 |
abdominal segment of trunk | 3.04e-11 | 60 |
abdomen | 3.04e-11 | 60 |
endocrine gland | 5.12e-11 | 35 |
endocrine system | 9.62e-09 | 45 |
foregut | 5.87e-08 | 87 |
gut epithelium | 2.08e-07 | 54 |
primitive nephron | 6.04e-07 | 7 |
renal glomerulus | 6.04e-07 | 7 |
renal corpuscle | 6.04e-07 | 7 |
glomerular capsule | 6.04e-07 | 7 |
metanephric mesenchyme | 6.04e-07 | 7 |
glomerular tuft | 6.04e-07 | 7 |
S-shaped body | 6.04e-07 | 7 |
renal vesicle | 6.04e-07 | 7 |
comma-shaped body | 6.04e-07 | 7 |
trunk region element | 6.30e-07 | 101 |
gland | 7.68e-07 | 59 |