FFCP PHASE1:Hg19::chr21:44592750..44592758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-361bp_to_CU686889_5end | |association_with_transcript=-361bp_to_CU686889_5end | ||
|cluster_id=chr21:44592750..44592758,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_4_at_CU686889_5end | |description=CAGE_peak_4_at_CU686889_5end | ||
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|ontology_enrichment_celltype=CL:0002600!7.67e-18!2;CL:0000306!1.22e-09!4;CL:0002222!1.22e-09!4;CL:0002224!1.22e-09!4;CL:0002322!7.01e-08!5 | |ontology_enrichment_celltype=CL:0002600!7.67e-18!2;CL:0000306!1.22e-09!4;CL:0002222!1.22e-09!4;CL:0002224!1.22e-09!4;CL:0002322!7.01e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4 | |ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010077!1.22e-09!4;UBERON:0005389!1.22e-09!4;UBERON:0000484!1.22e-09!4;UBERON:0002546!1.22e-09!4;UBERON:0000965!1.22e-09!4;UBERON:0001803!1.22e-09!4;UBERON:0003073!1.22e-09!4;UBERON:0005426!1.22e-09!4;UBERON:0000970!1.17e-07!20;UBERON:0002104!2.44e-07!21;UBERON:0000020!8.87e-07!23 | |ontology_enrichment_uberon=UBERON:0010077!1.22e-09!4;UBERON:0005389!1.22e-09!4;UBERON:0000484!1.22e-09!4;UBERON:0002546!1.22e-09!4;UBERON:0000965!1.22e-09!4;UBERON:0001803!1.22e-09!4;UBERON:0003073!1.22e-09!4;UBERON:0005426!1.22e-09!4;UBERON:0000970!1.17e-07!20;UBERON:0002104!2.44e-07!21;UBERON:0000020!8.87e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0000076,1.07e-13,8;UBERON:0007625,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
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|short_description=p4@CU686889 | |short_description=p4@CU686889 | ||
}} | }} |
Latest revision as of 18:16, 28 July 2015
Short description: | p4@CU686889 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU686889_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -361bp_to_CU686889_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.14e-26 | 4 |
vertebrate lens cell | 7.14e-26 | 4 |
lens epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.14e-26 | 4 |
transparent eye structure | 7.14e-26 | 4 |
simple cuboidal epithelium | 7.14e-26 | 4 |
cranial placode | 7.14e-26 | 4 |
lens of camera-type eye | 7.14e-26 | 4 |
epithelium of lens | 7.14e-26 | 4 |
lens placode | 7.14e-26 | 4 |
lens vesicle | 7.14e-26 | 4 |
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
external ectoderm | 1.07e-13 | 8 |
pigment epithelium of eye | 2.37e-10 | 11 |
anterior segment of eyeball | 2.00e-08 | 14 |