FFCP PHASE1:Hg19::chr21:44168074..44168079,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:44168074..44168079,+ | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr21:44168074..44168079,+ | |||
|id=chr21:44168074..44168079,+ | |||
|ontology_enrichment_celltype=CL:0002166!3.11e-21!3;CL:0000244!4.79e-16!4;CL:0000731!4.79e-16!4;CL:0002621!5.99e-10!3;CL:0002336!6.97e-08!1;CL:0002261!6.97e-08!1;CL:0002170!6.97e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.28e-84;3!CL:0000244;6.88e-64;4!CL:0000731;6.88e-64;4!CL:0002159;6.89e-19;14!CL:0002621;1.04e-10;3!CL:0002077;5.98e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.21e-85,3;CL:0000244,7.67e-64,4;CL:0000731,7.67e-64,4;CL:0002159,6.09e-19,14;CL:0002621,1.20e-10,3;CL:0002077,3.16e-08,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!1.04e-07!1;DOID:326!1.04e-07!1;DOID:3978!1.04e-07!1;DOID:3394!1.04e-07!1;DOID:5844!1.04e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!4.31e-18!6;UBERON:0001708!4.56e-16!4;UBERON:0001704!4.56e-16!4;UBERON:0000365!6.10e-13!5;UBERON:0002090!7.04e-11!6;UBERON:0001949!5.99e-10!3;UBERON:0004913!6.52e-08!1;UBERON:0003703!6.52e-08!1;UBERON:0001174!6.52e-08!1;UBERON:0004914!6.52e-08!1;UBERON:0002902!1.87e-07!1;UBERON:0009899!1.87e-07!1;UBERON:0002581!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;9.50e-64;4!UBERON:0008895;9.50e-64;4!UBERON:0000365;2.51e-51;5!UBERON:0011159;3.24e-51;5!UBERON:0005910;6.03e-43;6!UBERON:0000486;5.45e-38;12!UBERON:0011137;8.35e-24;11!UBERON:0010323;8.35e-24;11!UBERON:0000075;1.25e-16;16!UBERON:0001949;1.04e-10;3!UBERON:0004765;1.60e-10;26!UBERON:0006554;3.14e-09;30!UBERON:0001008;3.14e-09;30!UBERON:0005911;3.87e-09;36!UBERON:0001434;7.34e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.18e-64,4;UBERON:0008895,6.18e-64,4;UBERON:0011159,2.30e-51,5;UBERON:0000365,2.73e-51,5;UBERON:0010188,5.62e-43,6;UBERON:0002539,5.62e-43,6;UBERON:0008816,5.62e-43,6;UBERON:0005910,6.48e-43,6;UBERON:0010323,7.14e-24,11;UBERON:0011137,6.09e-19,14;UBERON:0000075,1.12e-16,16;UBERON:0008814,6.53e-15,18;UBERON:0001949,1.20e-10,3;UBERON:0000033,1.42e-08,56;UBERON:0000153,8.76e-08,62;UBERON:0007811,8.76e-08,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,9.07103492273841,1.98485136139341,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0,2.15252686335615,0,3.99087138183008,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:44168074..44168079,+ | |||
}} |
Latest revision as of 18:13, 28 July 2015
Short description: | p@chr21:44168074..44168079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44168074..44168079, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.21e-85 | 3 |
transitional epithelial cell | 7.67e-64 | 4 |
urothelial cell | 7.67e-64 | 4 |
general ecto-epithelial cell | 6.09e-19 | 14 |
gingival epithelial cell | 1.20e-10 | 3 |
ecto-epithelial cell | 3.16e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 6.18e-64 | 4 |
splanchnocranium | 6.18e-64 | 4 |
primary subdivision of cranial skeletal system | 2.30e-51 | 5 |
urothelium | 2.73e-51 | 5 |
protuberance | 5.62e-43 | 6 |
pharyngeal arch | 5.62e-43 | 6 |
embryonic head | 5.62e-43 | 6 |
transitional epithelium | 6.48e-43 | 6 |
cranial skeletal system | 7.14e-24 | 11 |
axial skeletal system | 6.09e-19 | 14 |
subdivision of skeletal system | 1.12e-16 | 16 |
pharyngeal arch system | 6.53e-15 | 18 |
gingival epithelium | 1.20e-10 | 3 |
head | 1.42e-08 | 56 |
anterior region of body | 8.76e-08 | 62 |
craniocervical region | 8.76e-08 | 62 |