FFCP PHASE1:Hg19::chr21:43944597..43944614,-: Difference between revisions
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|id=chr21:43944597..43944614,-
|short_description=p@chr21:43944597..43944614,-
|description=CAGE_peak_at_chr21:43944597..43944614,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:43944597..43944614,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_at_chr21:43944597..43944614,- | |||
|id=chr21:43944597..43944614,- | |||
|ontology_enrichment_celltype=CL:0000767!7.32e-10!3;CL:0001014!7.62e-07!2;CL:0001016!7.62e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.88e-19;1!CL:0001024;1.88e-19;1!CL:0000236;2.29e-13;13!CL:0000945;1.65e-07;24!CL:0000226;2.19e-07;3!CL:0000842;2.19e-07;3!CL:0000767;2.55e-07;3!CL:0000322;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.88e-19,1;CL:0000236,1.86e-12,14;CL:0000945,1.65e-07,24;CL:0000826,1.65e-07,24;CL:0000226,2.19e-07,3;CL:0000842,2.19e-07,3;CL:0000767,2.63e-07,3;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;3.85e-11;7!DOID:3904;3.85e-11;7!DOID:3910;3.13e-10;2!DOID:3905;7.16e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.85e-11,7;DOID:3904,3.85e-11,7;DOID:3910,3.58e-10,2;DOID:3905,7.16e-09,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.13e-10;2!UBERON:0004903;3.13e-10;2!UBERON:0002173;3.13e-10;2!UBERON:0002186;3.13e-10;2!UBERON:0004821;3.06e-07;3!UBERON:0007499;3.06e-07;3!UBERON:0003215;3.06e-07;3!UBERON:0010368;3.06e-07;3!UBERON:0009911;3.06e-07;3!UBERON:0002299;3.06e-07;3!UBERON:0006524;3.06e-07;3!UBERON:0008874;3.06e-07;3!UBERON:0002169;3.06e-07;3!UBERON:0004894;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.99e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
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| ||
|short_description=p@chr21:43944597..43944614,- | |||
}} | }} |
Latest revision as of 18:11, 28 July 2015
Short description: | p@chr21:43944597..43944614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:43944597..43944614, - |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.88e-19 | 1 |
B cell | 1.86e-12 | 14 |
lymphocyte of B lineage | 1.65e-07 | 24 |
pro-B cell | 1.65e-07 | 24 |
single nucleate cell | 2.19e-07 | 3 |
mononuclear cell | 2.19e-07 | 3 |
basophil | 2.63e-07 | 3 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 2.99e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.85e-11 | 7 |
bronchogenic carcinoma | 3.85e-11 | 7 |
lung adenocarcinoma | 3.58e-10 | 2 |
lung carcinoma | 7.16e-09 | 9 |