FFCP PHASE1:Hg19::chr21:39678875..39678880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39678875..39678880,- | |||
|description=CAGE_peak_at_chr21:39678875..39678880,- | |description=CAGE_peak_at_chr21:39678875..39678880,- | ||
|id=chr21:39678875..39678880,- | |id=chr21:39678875..39678880,- | ||
|ontology_enrichment_celltype=CL:0002570!1.16e-16!8;CL:0000048!4.95e-13!430;CL:0000723!1.09e-12!436;CL:0000188!1.65e-12!9;CL:0000034!3.02e-12!444;CL:0000594!1.08e-10!3;CL:0002540!6.29e-10!6;CL:0002371!1.11e-08!591;CL:0000680!2.74e-08!57;CL:0000056!2.74e-08!57;CL:0000355!2.74e-08!57;CL:0000515!4.06e-08!4;CL:0002320!9.17e-08!365;CL:0002602!1.24e-07!2;CL:0000144!1.55e-07!625;CL:0000134!7.05e-07!358 | |ontology_enrichment_celltype=CL:0002570!1.16e-16!8;CL:0000048!4.95e-13!430;CL:0000723!1.09e-12!436;CL:0000188!1.65e-12!9;CL:0000034!3.02e-12!444;CL:0000594!1.08e-10!3;CL:0002540!6.29e-10!6;CL:0002371!1.11e-08!591;CL:0000680!2.74e-08!57;CL:0000056!2.74e-08!57;CL:0000355!2.74e-08!57;CL:0000515!4.06e-08!4;CL:0002320!9.17e-08!365;CL:0002602!1.24e-07!2;CL:0000144!1.55e-07!625;CL:0000134!7.05e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.10e-20;8!CL:0000723;3.38e-12;61!CL:0000048;4.49e-12;58!CL:0000569;3.42e-11;4!CL:0000034;1.58e-10;69!CL:0000134;2.32e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,9.92e-21,8;CL:0000569,3.79e-11,4;CL:0000011,3.79e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000011;3.42e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!2.17e-29!14;DOID:120!4.85e-14!27;DOID:193!6.64e-13!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.00e-12;14!DOID:120;6.43e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.00e-12,14;DOID:120,6.43e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000992!2.36e-21!13;UBERON:0002118!2.12e-18!5;UBERON:0004532!2.12e-18!5;UBERON:0002119!5.48e-15!4;UBERON:0004531!5.48e-15!4;UBERON:0000991!1.57e-12!21;UBERON:0009196!1.57e-12!21;UBERON:0009117!1.57e-12!21;UBERON:0005564!1.57e-12!21;UBERON:0004176!7.02e-12!22;UBERON:0000914!7.40e-10!83;UBERON:0002329!7.40e-10!83;UBERON:0003077!7.40e-10!83;UBERON:0003059!7.40e-10!83;UBERON:0007282!7.40e-10!83;UBERON:0009618!7.40e-10!83;UBERON:0007285!7.40e-10!83;UBERON:0004290!1.06e-09!70;UBERON:0001013!3.46e-09!14;UBERON:0000486!7.70e-09!82;UBERON:0002204!5.11e-08!167;UBERON:0009568!1.24e-07!2;UBERON:0002216!1.24e-07!2;UBERON:0002209!1.24e-07!2;UBERON:0002213!1.24e-07!2;UBERON:0004267!1.24e-07!2;UBERON:0006444!1.24e-07!2;UBERON:0001995!1.24e-07!2;UBERON:0004715!1.24e-07!2;UBERON:0001468!1.24e-07!2;UBERON:0001130!1.24e-07!2;UBERON:0001066!1.24e-07!2;UBERON:0001134!1.49e-07!61;UBERON:0002036!1.49e-07!61;UBERON:0003082!1.49e-07!61;UBERON:0002384!2.66e-07!375;UBERON:0002385!3.19e-07!63;UBERON:0001015!3.19e-07!63;UBERON:0000383!3.19e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.05e-32;5!UBERON:0000992;2.68e-13;13!UBERON:0001013;2.66e-12;14!UBERON:0000991;1.27e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.05e-32,5;UBERON:0000992,2.68e-13,13;UBERON:0001013,2.51e-12,14;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22 | |||
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|short_description=p@chr21:39678875..39678880,- | |short_description=p@chr21:39678875..39678880,- | ||
}} | }} |
Latest revision as of 17:52, 28 July 2015
Short description: | p@chr21:39678875..39678880, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39678875..39678880, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 9.92e-21 | 8 |
cardiac mesenchymal cell | 3.79e-11 | 4 |
migratory trunk neural crest cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.05e-32 | 5 |
female gonad | 2.68e-13 | 13 |
adipose tissue | 2.51e-12 | 14 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.00e-12 | 14 |
female reproductive organ cancer | 6.43e-07 | 27 |