FFCP PHASE1:Hg19::chr21:39627673..39627684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39627673..39627684,+ | |||
|coexpression_cluster_id=C641 | |coexpression_cluster_id=C641 | ||
|description=CAGE_peak_at_chr21:39627673..39627684,+ | |description=CAGE_peak_at_chr21:39627673..39627684,+ | ||
|id=chr21:39627673..39627684,+ | |id=chr21:39627673..39627684,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.68e-99!42;CL:0000860!4.96e-92!45;CL:0002194!9.23e-69!63;CL:0000576!9.23e-69!63;CL:0000040!9.23e-69!63;CL:0000559!9.23e-69!63;CL:0002009!1.51e-66!65;CL:0000839!1.47e-61!70;CL:0000766!4.73e-61!76;CL:0000557!1.21e-60!71;CL:0000763!3.40e-40!112;CL:0000049!3.40e-40!112;CL:0002087!1.17e-37!119;CL:0002031!5.67e-36!124;CL:0000738!5.24e-34!140;CL:0002032!3.37e-28!165;CL:0000837!3.37e-28!165;CL:0000037!7.16e-27!172;CL:0000566!7.16e-27!172;CL:0000988!3.76e-25!182;CL:0000134!1.75e-10!358;CL:0002320!3.45e-10!365;CL:0000219!3.78e-09!390;CL:0000048!6.68e-08!430;CL:0000723!1.01e-07!436;CL:0000034!1.71e-07!444 | |ontology_enrichment_celltype=CL:0002057!6.68e-99!42;CL:0000860!4.96e-92!45;CL:0002194!9.23e-69!63;CL:0000576!9.23e-69!63;CL:0000040!9.23e-69!63;CL:0000559!9.23e-69!63;CL:0002009!1.51e-66!65;CL:0000839!1.47e-61!70;CL:0000766!4.73e-61!76;CL:0000557!1.21e-60!71;CL:0000763!3.40e-40!112;CL:0000049!3.40e-40!112;CL:0002087!1.17e-37!119;CL:0002031!5.67e-36!124;CL:0000738!5.24e-34!140;CL:0002032!3.37e-28!165;CL:0000837!3.37e-28!165;CL:0000037!7.16e-27!172;CL:0000566!7.16e-27!172;CL:0000988!3.76e-25!182;CL:0000134!1.75e-10!358;CL:0002320!3.45e-10!365;CL:0000219!3.78e-09!390;CL:0000048!6.68e-08!430;CL:0000723!1.01e-07!436;CL:0000034!1.71e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.19e-54;33!CL:0002057;7.19e-54;33!CL:0000473;1.91e-40;39!CL:0000234;1.91e-40;39!CL:0000576;1.91e-31;48!CL:0000766;1.68e-11;69!CL:0000763;1.16e-10;100!CL:0000738;1.91e-08;136!CL:0002087;9.11e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.22e-51,42;CL:0002057,5.22e-51,42;CL:0000473,1.37e-44,48;CL:0000234,1.37e-44,48;CL:0002194,1.37e-35,59;CL:0000576,1.37e-35,59;CL:0000040,1.37e-35,59;CL:0000559,1.37e-35,59;CL:0002009,1.98e-34,61;CL:0000839,7.93e-32,66;CL:0000557,2.37e-31,67;CL:0000766,3.58e-29,72;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.43e-38;42!CL:0000049;8.00e-08;108 | |||
|ontology_enrichment_disease=DOID:0060085!6.24e-08!1;DOID:3165!6.24e-08!1;DOID:0060121!6.24e-08!1;DOID:2438!6.24e-08!1;DOID:4418!6.24e-08!1 | |ontology_enrichment_disease=DOID:0060085!6.24e-08!1;DOID:3165!6.24e-08!1;DOID:0060121!6.24e-08!1;DOID:2438!6.24e-08!1;DOID:4418!6.24e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.01e-53!80;UBERON:0001474!1.94e-49!86;UBERON:0004765!5.83e-45!101;UBERON:0001434!5.83e-45!101;UBERON:0002390!4.46e-41!102;UBERON:0003061!4.46e-41!102;UBERON:0002193!4.74e-37!112;UBERON:0002405!5.61e-36!115;UBERON:0002204!1.59e-25!167;UBERON:0003081!4.06e-17!216;UBERON:0002384!8.70e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!2.01e-53!80;UBERON:0001474!1.94e-49!86;UBERON:0004765!5.83e-45!101;UBERON:0001434!5.83e-45!101;UBERON:0002390!4.46e-41!102;UBERON:0003061!4.46e-41!102;UBERON:0002193!4.74e-37!112;UBERON:0002405!5.61e-36!115;UBERON:0002204!1.59e-25!167;UBERON:0003081!4.06e-17!216;UBERON:0002384!8.70e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-27,76;UBERON:0001474,1.34e-25,82;UBERON:0004765,2.65e-23,90;UBERON:0002405,1.53e-22,93;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0001434,6.08e-21,100;UBERON:0002193,2.30e-19,108;UBERON:0002204,2.44e-12,167;UBERON:0003081,4.95e-10,203 | |||
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|short_description=p@chr21:39627673..39627684,+ | |short_description=p@chr21:39627673..39627684,+ | ||
}} | }} |
Latest revision as of 17:49, 28 July 2015
Short description: | p@chr21:39627673..39627684, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39627673..39627684, + |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.22e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.22e-51 | 42 |
defensive cell | 1.37e-44 | 48 |
phagocyte | 1.37e-44 | 48 |
monopoietic cell | 1.37e-35 | 59 |
monocyte | 1.37e-35 | 59 |
monoblast | 1.37e-35 | 59 |
promonocyte | 1.37e-35 | 59 |
macrophage dendritic cell progenitor | 1.98e-34 | 61 |
myeloid lineage restricted progenitor cell | 7.93e-32 | 66 |
granulocyte monocyte progenitor cell | 2.37e-31 | 67 |
myeloid leukocyte | 3.58e-29 | 72 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-27 | 76 |
bone element | 1.34e-25 | 82 |
skeletal element | 2.65e-23 | 90 |
immune system | 1.53e-22 | 93 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
skeletal system | 6.08e-21 | 100 |
hemolymphoid system | 2.30e-19 | 108 |
musculoskeletal system | 2.44e-12 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |