FFCP PHASE1:Hg19::chr21:36357123..36357129,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:36357123..36357129,- | |||
|description=CAGE_peak_at_chr21:36357123..36357129,- | |||
|id=chr21:36357123..36357129,- | |||
|ontology_enrichment_celltype=CL:0000037!2.07e-25!172;CL:0000566!2.07e-25!172;CL:0002032!2.45e-25!165;CL:0000837!2.45e-25!165;CL:0000988!1.19e-24!182;CL:0000738!8.81e-20!140;CL:0000763!1.08e-19!112;CL:0000049!1.08e-19!112;CL:0002087!1.38e-18!119;CL:0002031!4.06e-18!124;CL:0002057!2.40e-16!42;CL:0000766!4.79e-16!76;CL:0000860!1.01e-14!45;CL:0000839!1.10e-14!70;CL:0002194!6.64e-14!63;CL:0000576!6.64e-14!63;CL:0000040!6.64e-14!63;CL:0000559!6.64e-14!63;CL:0000557!2.55e-13!71;CL:0002009!3.37e-13!65;CL:0000134!1.71e-07!358;CL:0000084!1.95e-07!25;CL:0000827!1.95e-07!25;CL:0002320!5.59e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-14;33!CL:0002057;2.48e-14;33!CL:0000473;2.60e-12;39!CL:0000234;2.60e-12;39!CL:0000228;9.60e-12;1!CL:0002372;9.60e-12;1!CL:0000576;1.97e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.97e-13,48;CL:0000234,3.97e-13,48;CL:0000228,6.97e-12,1;CL:0002372,6.97e-12,1;CL:0000860,1.32e-11,42;CL:0002057,1.32e-11,42;CL:0000766,1.43e-10,72;CL:0002194,2.56e-10,59;CL:0000576,2.56e-10,59;CL:0000040,2.56e-10,59;CL:0000559,2.56e-10,59;CL:0000763,4.12e-10,108;CL:0000049,4.12e-10,108;CL:0002009,5.91e-10,61;CL:0000839,3.84e-09,66;CL:0000557,5.41e-09,67;CL:0002032,1.49e-07,161;CL:0000837,1.49e-07,161;CL:0000037,3.64e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.65e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!4.00e-08!51;DOID:0060083!4.00e-08!51;DOID:1240!5.64e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.93e-12;1!DOID:9119;9.60e-12;1!DOID:3369;9.60e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.93e-12,1;DOID:3369,6.26e-12,1;DOID:9119,8.64e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.06e-14!102;UBERON:0003061!7.06e-14!102;UBERON:0002193!3.77e-13!112;UBERON:0002371!1.26e-11!80;UBERON:0001474!3.65e-10!86;UBERON:0002405!8.95e-09!115;UBERON:0004765!1.31e-08!101;UBERON:0001434!1.31e-08!101;UBERON:0002384!1.84e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.85e-08,76;UBERON:0002390,2.00e-07,98;UBERON:0003061,2.00e-07,98;UBERON:0001474,3.39e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0.601633342410425,0.868043482863407,0,0,0,1.59938062657521,0,0.485168122375632,0.697287110717054,1.23350366406548,0.929119112685311,0.28769239232215,2.30544635876191,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0.659702600373432,0.997318288108159,1.27867425159808,0.290209238628584,1.13477044938228,0,1.7587406567972,2.08593167368081,0.868755378820466,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.822405995998037,0.83593247695339,0.32592226663359,0,0,0.334231370655521,0,0,1.08321545506006,1.40900451698243,0.780356085359269,2.13769275984779,0.829050053357545,0.869409257205157,0.14828656316206,0.535081656179426,0,0.566546713487831,0.383220493601921,0.68725489096526,0,0,0,0.950452044448374,0.451725357233318,0,0,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.528290604079356,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,1.42636905040718,0.144781306667579,0.410952645100767,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.322260734604821,0,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0,0,0,0,0,0.557409525377156,0,0.426851060090485,0.956557636372934,0.59873811429845,0,0,1.29848776109822,0.561594356226918,0,0,0,0.169291777801603,0,0,0.425846237690326,0.687010689511529,0,0,0,0.390776190804081,0,0,0.270455678475983,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.498635045700469,0,0,0,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0.300515217994437,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94634094001504,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0.183428598521679,0,0.381382095467167,0,0,0,0.20170506870352,0,0,3.43921026771203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.372448285775147,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:36357123..36357129,- | |||
}} |
Latest revision as of 17:37, 28 July 2015
Short description: | p@chr21:36357123..36357129, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:36357123..36357129, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.97e-13 | 48 |
phagocyte | 3.97e-13 | 48 |
multinucleate cell | 6.97e-12 | 1 |
myotube | 6.97e-12 | 1 |
classical monocyte | 1.32e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-11 | 42 |
myeloid leukocyte | 1.43e-10 | 72 |
monopoietic cell | 2.56e-10 | 59 |
monocyte | 2.56e-10 | 59 |
monoblast | 2.56e-10 | 59 |
promonocyte | 2.56e-10 | 59 |
myeloid cell | 4.12e-10 | 108 |
common myeloid progenitor | 4.12e-10 | 108 |
macrophage dendritic cell progenitor | 5.91e-10 | 61 |
myeloid lineage restricted progenitor cell | 3.84e-09 | 66 |
granulocyte monocyte progenitor cell | 5.41e-09 | 67 |
hematopoietic oligopotent progenitor cell | 1.49e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-07 | 161 |
hematopoietic stem cell | 3.64e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.85e-08 | 76 |
hematopoietic system | 2.00e-07 | 98 |
blood island | 2.00e-07 | 98 |
bone element | 3.39e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.93e-12 | 1 |
peripheral primitive neuroectodermal tumor | 6.26e-12 | 1 |
acute myeloid leukemia | 8.64e-12 | 1 |