FFCP PHASE1:Hg19::chr21:36208893..36208906,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:36208893..36208906,+ | |||
|coexpression_cluster_id=C525 | |coexpression_cluster_id=C525 | ||
|description=CAGE_peak_at_chr21:36208893..36208906,+ | |description=CAGE_peak_at_chr21:36208893..36208906,+ | ||
|id=chr21:36208893..36208906,+ | |id=chr21:36208893..36208906,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.78e-11!15;CL:0002521!2.64e-07!3 | |ontology_enrichment_celltype=CL:0000136!1.78e-11!15;CL:0002521!2.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002521;2.53e-21;3!CL:0002379;1.93e-16;1!CL:0002552;3.33e-13;5!CL:0000136;3.62e-11;13!CL:0002549;6.93e-09;2!CL:0002363;6.93e-09;2!CL:0002367;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.67e-21,3;CL:0002379,1.65e-16,1;CL:0002552,3.23e-13,5;CL:0000136,1.01e-09,15;CL:0002549,5.49e-09,2;CL:0002367,6.94e-09,2;CL:0002363,8.74e-09,2;CL:0000008,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.93e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.93e-16;1!DOID:3565;1.93e-16;1!DOID:4929;3.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.65e-16,1;DOID:3565,1.65e-16,1;DOID:4929,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005284!3.84e-10!5;UBERON:0003102!1.97e-08!95;UBERON:0005256!2.53e-08!143;UBERON:0002394!8.33e-08!4;UBERON:0003928!8.33e-08!4;UBERON:0002190!2.64e-07!3 | |ontology_enrichment_uberon=UBERON:0005284!3.84e-10!5;UBERON:0003102!1.97e-08!95;UBERON:0005256!2.53e-08!143;UBERON:0002394!8.33e-08!4;UBERON:0003928!8.33e-08!4;UBERON:0002190!2.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.53e-21;3!UBERON:0002072;3.33e-13;5!UBERON:0003566;6.93e-09;2!UBERON:0005629;6.93e-09;2!UBERON:0005358;6.93e-09;2!UBERON:0001777;6.93e-09;2!UBERON:0005969;6.93e-09;2!UBERON:0001886;6.93e-09;2!UBERON:0004086;6.93e-09;2!UBERON:0005282;6.93e-09;2!UBERON:0005281;6.93e-09;2!UBERON:0003956;6.93e-09;2!UBERON:0001828;1.34e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.67e-21,3;UBERON:0002072,3.43e-13,5;UBERON:0005629,5.49e-09,2;UBERON:0005358,5.49e-09,2;UBERON:0001886,5.49e-09,2;UBERON:0004086,5.49e-09,2;UBERON:0005282,5.49e-09,2;UBERON:0005281,5.49e-09,2;UBERON:0005969,6.94e-09,2;UBERON:0003956,6.94e-09,2;UBERON:0003566,8.74e-09,2;UBERON:0001777,8.74e-09,2;UBERON:0001828,1.31e-08,8 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,2.53299878168311,1.26343974685366,0.783556884599516,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0.454072282934794,1.72852777344,0.234321431833797,0,0,0.597794722207204,0.352303495931295,0.485618833104395,0.280901613404497,1.42907919878425,0,2.16984140469107,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0,0.600182192168805,0.206105058476878,0.515281080091258,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.717056761020258,0,0,0.354761064070598,0,0,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,2.50629644545853,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,2.75596948241297,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,3.14862178514523,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.609589624911347,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0.213454691755431,0,18.054865623424,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,2.53299878168311,1.26343974685366,0.783556884599516,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0.454072282934794,1.72852777344,0.234321431833797,0,0,0.597794722207204,0.352303495931295,0.485618833104395,0.280901613404497,1.42907919878425,0,2.16984140469107,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0,0.600182192168805,0.206105058476878,0.515281080091258,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.717056761020258,0,0,0.354761064070598,0,0,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,2.50629644545853,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,2.75596948241297,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,3.14862178514523,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.609589624911347,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0.213454691755431,0,18.054865623424,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr21:36208893..36208906,+ | |short_description=p@chr21:36208893..36208906,+ | ||
}} | }} |
Latest revision as of 17:34, 28 July 2015
Short description: | p@chr21:36208893..36208906, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:36208893..36208906, + |
Coexpression cluster: | C525_tubular_vagina_cervix_rectum_Placental_colon_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.67e-21 | 3 |
meningothelial cell | 1.65e-16 | 1 |
fibroblast of gingiva | 3.23e-13 | 5 |
fat cell | 1.01e-09 | 15 |
fibroblast of choroid plexus | 5.49e-09 | 2 |
trabecular meshwork cell | 6.94e-09 | 2 |
keratocyte | 8.74e-09 | 2 |
migratory cranial neural crest cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.67e-21 | 3 |
hypodermis | 3.43e-13 | 5 |
vascular plexus | 5.49e-09 | 2 |
ventricle of nervous system | 5.49e-09 | 2 |
choroid plexus | 5.49e-09 | 2 |
brain ventricle | 5.49e-09 | 2 |
ventricular system of brain | 5.49e-09 | 2 |
ventricular system of central nervous system | 5.49e-09 | 2 |
reticulum trabeculare | 6.94e-09 | 2 |
aqueous drainage system | 6.94e-09 | 2 |
head connective tissue | 8.74e-09 | 2 |
substantia propria of cornea | 8.74e-09 | 2 |
gingiva | 1.31e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.65e-16 | 1 |
meningioma | 1.65e-16 | 1 |
tubular adenocarcinoma | 3.43e-09 | 2 |