FFCP PHASE1:Hg19::chr21:32653398..32653401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:32653398..32653401,- | |||
|description=CAGE_peak_at_chr21:32653398..32653401,- | |description=CAGE_peak_at_chr21:32653398..32653401,- | ||
|id=chr21:32653398..32653401,- | |id=chr21:32653398..32653401,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.48e-18;2!CL:0001016;5.48e-18;2!CL:0000322;2.74e-12;3!CL:0000453;5.35e-08;5!CL:0000840;7.17e-07;5!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0001014;5.48e-18;2!CL:0001016;5.48e-18;2!CL:0000322;2.74e-12;3!CL:0000453;5.35e-08;5!CL:0000840;7.17e-07;5!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.48e-18,2;CL:0001016,5.48e-18,2;CL:0000322,3.24e-12,3;CL:0000453,5.35e-08,5;CL:0000840,7.17e-07,5;CL:0001029,7.17e-07,5;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.09e-44;3!CL:0000031;8.72e-07;6 | |ontology_enrichment_development_v019=UBERON:0006215;1.09e-44;3!CL:0000031;8.72e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;9.86e-18;2!DOID:3908;6.78e-08;5 | |ontology_enrichment_disease_v019=DOID:3910;9.86e-18;2!DOID:3908;6.78e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.27e-17,2;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.53e-15!57;UBERON:0005068!9.53e-15!57;UBERON:0006241!9.53e-15!57;UBERON:0007135!9.53e-15!57;UBERON:0002791!5.40e-14!33;UBERON:0002020!1.04e-13!34;UBERON:0003528!1.04e-13!34;UBERON:0001893!1.95e-13!34;UBERON:0002780!4.21e-13!41;UBERON:0001890!4.21e-13!41;UBERON:0006240!4.21e-13!41;UBERON:0002616!1.09e-12!59;UBERON:0003080!1.18e-12!42;UBERON:0001869!1.09e-11!32;UBERON:0005743!8.78e-11!86;UBERON:0001017!1.06e-10!82;UBERON:0000955!1.23e-10!69;UBERON:0006238!1.23e-10!69;UBERON:0000153!1.59e-10!129;UBERON:0007811!1.59e-10!129;UBERON:0003056!6.57e-10!61;UBERON:0003075!7.43e-10!86;UBERON:0007284!7.43e-10!86;UBERON:0002346!7.88e-10!90;UBERON:0000073!1.01e-09!94;UBERON:0001016!1.01e-09!94;UBERON:0000956!3.54e-09!25;UBERON:0000203!3.54e-09!25;UBERON:0000033!1.58e-08!123;UBERON:0002619!6.12e-08!22;UBERON:0000924!1.66e-07!173;UBERON:0006601!1.66e-07!173;UBERON:0004121!2.05e-07!169;UBERON:0007023!7.55e-07!115 | |ontology_enrichment_uberon=UBERON:0001049!9.53e-15!57;UBERON:0005068!9.53e-15!57;UBERON:0006241!9.53e-15!57;UBERON:0007135!9.53e-15!57;UBERON:0002791!5.40e-14!33;UBERON:0002020!1.04e-13!34;UBERON:0003528!1.04e-13!34;UBERON:0001893!1.95e-13!34;UBERON:0002780!4.21e-13!41;UBERON:0001890!4.21e-13!41;UBERON:0006240!4.21e-13!41;UBERON:0002616!1.09e-12!59;UBERON:0003080!1.18e-12!42;UBERON:0001869!1.09e-11!32;UBERON:0005743!8.78e-11!86;UBERON:0001017!1.06e-10!82;UBERON:0000955!1.23e-10!69;UBERON:0006238!1.23e-10!69;UBERON:0000153!1.59e-10!129;UBERON:0007811!1.59e-10!129;UBERON:0003056!6.57e-10!61;UBERON:0003075!7.43e-10!86;UBERON:0007284!7.43e-10!86;UBERON:0002346!7.88e-10!90;UBERON:0000073!1.01e-09!94;UBERON:0001016!1.01e-09!94;UBERON:0000956!3.54e-09!25;UBERON:0000203!3.54e-09!25;UBERON:0000033!1.58e-08!123;UBERON:0002619!6.12e-08!22;UBERON:0000924!1.66e-07!173;UBERON:0006601!1.66e-07!173;UBERON:0004121!2.05e-07!169;UBERON:0007023!7.55e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.74e-23;6!UBERON:0004903;9.86e-18;2!UBERON:0002173;9.86e-18;2!UBERON:0002186;9.86e-18;2!UBERON:0002680;1.09e-15;9!UBERON:0001895;1.09e-15;9!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0004733;4.94e-12;12!UBERON:0002028;4.94e-12;12!UBERON:0004732;3.47e-11;13!UBERON:0009856;1.50e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0002037;5.74e-23;6!UBERON:0004903;9.86e-18;2!UBERON:0002173;9.86e-18;2!UBERON:0002186;9.86e-18;2!UBERON:0002680;1.09e-15;9!UBERON:0001895;1.09e-15;9!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0004733;4.94e-12;12!UBERON:0002028;4.94e-12;12!UBERON:0004732;3.47e-11;13!UBERON:0009856;1.50e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-23,6;UBERON:0006215,4.86e-23,6;UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0002680,9.73e-16,9;UBERON:0001895,9.73e-16,9;UBERON:0010092,9.73e-16,9;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0004733,4.54e-12,12;UBERON:0002028,4.54e-12,12;UBERON:0007277,4.54e-12,12;UBERON:0004732,3.21e-11,13;UBERON:0003076,7.41e-10,15;UBERON:0003057,7.41e-10,15 | |||
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| ||
|short_description=p@chr21:32653398..32653401,- | |short_description=p@chr21:32653398..32653401,- | ||
}} | }} |
Latest revision as of 17:16, 28 July 2015
Short description: | p@chr21:32653398..32653401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:32653398..32653401, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.48e-18 | 2 |
immature CD1a-positive Langerhans cell | 5.48e-18 | 2 |
pneumocyte | 3.24e-12 | 3 |
Langerhans cell | 5.35e-08 | 5 |
immature conventional dendritic cell | 7.17e-07 | 5 |
common dendritic progenitor | 7.17e-07 | 5 |
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.86e-23 | 6 |
rhombic lip | 4.86e-23 | 6 |
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
regional part of metencephalon | 9.73e-16 | 9 |
metencephalon | 9.73e-16 | 9 |
future metencephalon | 9.73e-16 | 9 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
segmental subdivision of hindbrain | 4.54e-12 | 12 |
hindbrain | 4.54e-12 | 12 |
presumptive hindbrain | 4.54e-12 | 12 |
segmental subdivision of nervous system | 3.21e-11 | 13 |
posterior neural tube | 7.41e-10 | 15 |
chordal neural plate | 7.41e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.27e-17 | 2 |
non-small cell lung carcinoma | 7.49e-08 | 5 |