FFCP PHASE1:Hg19::chr21:28338976..28338991,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:28338976..28338991,+ | |||
|description=CAGE_peak_at_chr21:28338976..28338991,+ | |description=CAGE_peak_at_chr21:28338976..28338991,+ | ||
|id=chr21:28338976..28338991,+ | |id=chr21:28338976..28338991,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.37e-07!75;CL:0000055!8.05e-07!180;CL:0000499!8.71e-07!27 | |ontology_enrichment_celltype=CL:0000057!2.37e-07!75;CL:0000055!8.05e-07!180;CL:0000499!8.71e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000197;2.45e-15;6!CL:0000098;2.45e-15;6!CL:0002167;2.45e-15;6!CL:0000153;3.77e-10;9!CL:0000447;3.77e-10;9!CL:0000214;2.43e-08;3!CL:0000135;5.43e-08;3!CL:0000388;5.43e-08;3 | |ontology_enrichment_celltype_v019=CL:0000197;2.45e-15;6!CL:0000098;2.45e-15;6!CL:0002167;2.45e-15;6!CL:0000153;3.77e-10;9!CL:0000447;3.77e-10;9!CL:0000214;2.43e-08;3!CL:0000135;5.43e-08;3!CL:0000388;5.43e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.69e-15,6;CL:0000098,2.69e-15,6;CL:0002167,2.69e-15,6;CL:0000153,3.65e-10,9;CL:0000447,3.65e-10,9;CL:0000214,2.22e-08,3;CL:0000135,3.82e-08,3;CL:0000388,3.82e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.32e-10;9!UBERON:0000042;8.32e-10;9!UBERON:0006915;2.43e-08;3!UBERON:0007616;2.43e-08;3!UBERON:0002217;2.43e-08;3!UBERON:0002018;2.43e-08;3!UBERON:0007846;5.43e-08;3!UBERON:0000043;5.43e-08;3!UBERON:0007845;5.43e-08;3!UBERON:0001282;5.13e-07;1!UBERON:0009842;5.13e-07;1!UBERON:0003704;5.13e-07;1!UBERON:0001171;5.13e-07;1!UBERON:0001172;5.13e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0004457;8.32e-10;9!UBERON:0000042;8.32e-10;9!UBERON:0006915;2.43e-08;3!UBERON:0007616;2.43e-08;3!UBERON:0002217;2.43e-08;3!UBERON:0002018;2.43e-08;3!UBERON:0007846;5.43e-08;3!UBERON:0000043;5.43e-08;3!UBERON:0007845;5.43e-08;3!UBERON:0001282;5.13e-07;1!UBERON:0009842;5.13e-07;1!UBERON:0003704;5.13e-07;1!UBERON:0001171;5.13e-07;1!UBERON:0001172;5.13e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.22e-08,3;UBERON:0007616,2.22e-08,3;UBERON:0002217,2.22e-08,3;UBERON:0002018,2.22e-08,3;UBERON:0007846,3.82e-08,3;UBERON:0000043,3.82e-08,3;UBERON:0007845,3.82e-08,3;UBERON:0004923,1.13e-07,66;UBERON:0004457,1.87e-07,12;UBERON:0000042,1.87e-07,12;UBERON:0001282,5.13e-07,1;UBERON:0009842,5.13e-07,1;UBERON:0003704,5.13e-07,1;UBERON:0001171,5.13e-07,1;UBERON:0001172,5.13e-07,1 | |||
|phase1_expression=1.81678379270557,0.642301571672949,2.81908808191942,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0.50133791063589,6.51809335323707,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0,0.358779271377724,1.70845911054854,0.635795703478686,0.900273288253207,0.103052529238439,0,1.11670113798954,0.337552664482532,0,0.252433774244115,2.48534726334208,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,2.39344304926383,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,5.8231841228626,9.45673640624957,8.04282316673067,2.22568688486155,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0.744323423456331,0,1.12264037773229,1.28139149255701,0,0.965123526861645,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.459257792658427,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.457847324091717,0.247528499761764,0,0,0,0,0.462145851343933,0,0,0.214840489736547,0.145016693914229,0.596586391912706,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.539617372749944,1.09814811894422,0.471249609382746,0,0,0,0.48763373908959,0,0,0.136499911407986,2.68670320712054,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,3.58882980006029,2.63435914367922,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,1.11308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,4.32979812218605,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.219267951258557,0.246346371159628,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0,0,0,0.50313580350515,2.66943366478961,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0.796191777397232,0.800055529326307,0,1.01024846629776,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,2.14906609297785,0,1.31570429747224,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0.352675943690684,3.6749457282384,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0.80682027481408,0.781514011233092,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.84870251452567,2.59575937274273,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,1.0105859447911,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=1.81678379270557,0.642301571672949,2.81908808191942,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0.50133791063589,6.51809335323707,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0,0.358779271377724,1.70845911054854,0.635795703478686,0.900273288253207,0.103052529238439,0,1.11670113798954,0.337552664482532,0,0.252433774244115,2.48534726334208,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,2.39344304926383,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,5.8231841228626,9.45673640624957,8.04282316673067,2.22568688486155,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0.744323423456331,0,1.12264037773229,1.28139149255701,0,0.965123526861645,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.459257792658427,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.457847324091717,0.247528499761764,0,0,0,0,0.462145851343933,0,0,0.214840489736547,0.145016693914229,0.596586391912706,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.539617372749944,1.09814811894422,0.471249609382746,0,0,0,0.48763373908959,0,0,0.136499911407986,2.68670320712054,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,3.58882980006029,2.63435914367922,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,1.11308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,4.32979812218605,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.219267951258557,0.246346371159628,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0,0,0,0.50313580350515,2.66943366478961,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0.796191777397232,0.800055529326307,0,1.01024846629776,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,2.14906609297785,0,1.31570429747224,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0.352675943690684,3.6749457282384,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0.80682027481408,0.781514011233092,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.84870251452567,2.59575937274273,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,1.0105859447911,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr21:28338976..28338991,+ | |short_description=p@chr21:28338976..28338991,+ | ||
}} | }} |
Latest revision as of 17:06, 28 July 2015
Short description: | p@chr21:28338976..28338991, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:28338976..28338991, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.69e-15 | 6 |
sensory epithelial cell | 2.69e-15 | 6 |
olfactory epithelial cell | 2.69e-15 | 6 |
GAG secreting cell | 3.65e-10 | 9 |
carbohydrate secreting cell | 3.65e-10 | 9 |
synovial cell | 2.22e-08 | 3 |
fibrocyte | 3.82e-08 | 3 |
tendon cell | 3.82e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.22e-08 | 3 |
layer of synovial tissue | 2.22e-08 | 3 |
synovial joint | 2.22e-08 | 3 |
synovial membrane of synovial joint | 2.22e-08 | 3 |
dense regular connective tissue | 3.82e-08 | 3 |
tendon | 3.82e-08 | 3 |
regular connective tissue | 3.82e-08 | 3 |
organ component layer | 1.13e-07 | 66 |
cavity lining | 1.87e-07 | 12 |
serous membrane | 1.87e-07 | 12 |
intralobular bile duct | 5.13e-07 | 1 |
acinus | 5.13e-07 | 1 |
intrahepatic bile duct | 5.13e-07 | 1 |
portal lobule | 5.13e-07 | 1 |
hepatic acinus | 5.13e-07 | 1 |