Personal tools

FFCP PHASE1:Hg19::chr21:26714477..26714509,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr21:26714477..26714509,+
|coexpression_cluster_id=C199
|description=CAGE_peak_at_chr21:26714477..26714509,+
|description=CAGE_peak_at_chr21:26714477..26714509,+
|id=chr21:26714477..26714509,+
|id=chr21:26714477..26714509,+
|ontology_enrichment_celltype=CL:0000054!1.07e-17!2;CL:0000137!1.07e-17!2;CL:0000092!1.07e-17!2;CL:0000243!7.61e-09!15;CL:0000125!7.61e-09!15;CL:0000030!7.61e-09!15;CL:0000339!7.61e-09!15;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000667!8.02e-07!6;CL:0000058!8.02e-07!6;CL:0000138!8.02e-07!6
|ontology_enrichment_celltype=CL:0000054!1.07e-17!2;CL:0000137!1.07e-17!2;CL:0000092!1.07e-17!2;CL:0000243!7.61e-09!15;CL:0000125!7.61e-09!15;CL:0000030!7.61e-09!15;CL:0000339!7.61e-09!15;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000667!8.02e-07!6;CL:0000058!8.02e-07!6;CL:0000138!8.02e-07!6
|ontology_enrichment_celltype_v019=CL:0000243;2.07e-24;15!CL:0000125;2.07e-24;15!CL:0000095;5.37e-22;17!CL:0002319;6.71e-16;25
|ontology_enrichment_celltype_v019_2=CL:0000243,2.07e-24,15;CL:0000125,2.07e-24,15;CL:0000030,2.07e-24,15;CL:0000339,2.07e-24,15;CL:0000095,5.37e-22,17;CL:0000123,5.37e-22,17;CL:0002319,6.71e-16,25;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59
|ontology_enrichment_development_v019=UBERON:0006238;6.80e-37;10!CL:0000339;2.07e-24;15
|ontology_enrichment_disease=DOID:3371!3.61e-34!1;DOID:4549!3.61e-34!1;DOID:5861!3.61e-34!1;DOID:6496!3.61e-34!1;DOID:0060085!7.06e-34!1;DOID:3165!7.06e-34!1;DOID:0060121!7.06e-34!1;DOID:2438!7.06e-34!1;DOID:4418!7.06e-34!1;DOID:201!6.78e-23!6;DOID:0060100!6.78e-23!6;DOID:200!1.07e-17!2;DOID:4305!1.07e-17!2;DOID:3093!4.07e-12!11;DOID:0060072!1.57e-09!4
|ontology_enrichment_disease=DOID:3371!3.61e-34!1;DOID:4549!3.61e-34!1;DOID:5861!3.61e-34!1;DOID:6496!3.61e-34!1;DOID:0060085!7.06e-34!1;DOID:3165!7.06e-34!1;DOID:0060121!7.06e-34!1;DOID:2438!7.06e-34!1;DOID:4418!7.06e-34!1;DOID:201!6.78e-23!6;DOID:0060100!6.78e-23!6;DOID:200!1.07e-17!2;DOID:4305!1.07e-17!2;DOID:3093!4.07e-12!11;DOID:0060072!1.57e-09!4
|ontology_enrichment_disease_v019=DOID:3093;5.98e-34;11
|ontology_enrichment_disease_v019_2=DOID:3093,5.98e-34,11
|ontology_enrichment_uberon=UBERON:0002418!2.31e-12!3;UBERON:0004755!2.31e-12!3;UBERON:0000014!1.57e-09!4
|ontology_enrichment_uberon=UBERON:0002418!2.31e-12!3;UBERON:0004755!2.31e-12!3;UBERON:0000014!1.57e-09!4
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441280633457501,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,3.66941356398758,4.60252523774266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441280633457501,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,3.66941356398758,4.60252523774266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr21:26714477..26714509,+
|short_description=p@chr21:26714477..26714509,+
}}
}}

Latest revision as of 16:56, 28 July 2015

Short description:p@chr21:26714477..26714509, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr21:26714477..26714509, +
Coexpression cluster:C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr21:26714477..26714509,%2B&oldid=3499575"