FFCP PHASE1:Hg19::chr20:61297994..61298009,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:61297994..61298009,-
|short_description=p1@ENST00000451648
|description=CAGE_peak_1_at_ENST00000451648_5end
|association_with_transcript=-15bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000451648_5end | |||
|cluster_id=chr20:61297994..61298009,- | |||
|coexpression_cluster_id=C1872 | |||
|description=CAGE_peak_1_at_ENST00000451648_5end | |||
|id=chr20:61297994..61298009,- | |||
|ontology_enrichment_celltype=CL:0000148!7.11e-12!10;CL:0000541!7.11e-12!10;CL:0002077!6.39e-09!33;CL:0002567!1.49e-08!3;CL:0002327!2.05e-08!4;CL:0000147!4.37e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.37e-31;10!CL:0000147;3.69e-22;14!CL:0002567;1.65e-20;3!CL:0000710;2.99e-15;20!CL:0000075;4.59e-11;27!CL:0002077;3.64e-10;34!CL:0002178;1.21e-09;3!CL:0002566;5.58e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.37e-31,10;CL:0000541,2.37e-31,10;CL:0000147,3.70e-22,14;CL:0002567,1.65e-20,3;CL:0000710,2.99e-15,20;CL:0000075,4.59e-11,27;CL:0002077,4.93e-11,34;CL:0002178,1.18e-09,3;CL:0002566,5.58e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.51e-08;1!UBERON:0008801;7.51e-08;1!UBERON:0006242;1.58e-07;1!UBERON:0004874;2.62e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.54e-14;2!DOID:1909;2.39e-13;2!DOID:3111;1.39e-07;1!DOID:3603;1.39e-07;1!DOID:0050619;2.62e-07;1!DOID:1357;2.62e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.54e-14,2;DOID:1909,2.24e-13,2;DOID:3111,1.39e-07,1;DOID:3603,1.39e-07,1;DOID:0050619,3.17e-07,1;DOID:1357,3.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-15!115;UBERON:0002298!5.26e-09!8;UBERON:0004921!7.54e-09!129;UBERON:0004185!7.54e-09!129;UBERON:0004121!1.54e-08!169;UBERON:0001911!2.05e-08!4;UBERON:0005333!2.05e-08!4;UBERON:0008425!2.05e-08!4;UBERON:0005311!2.05e-08!4;UBERON:0000924!3.87e-08!173;UBERON:0006601!3.87e-08!173;UBERON:0000077!4.39e-08!130;UBERON:0001041!1.10e-07!98;UBERON:0006331!1.62e-07!3;UBERON:0001007!2.46e-07!155;UBERON:0001555!2.46e-07!155;UBERON:0007026!2.46e-07!155;UBERON:0000988!3.56e-07!3;UBERON:0000475!3.88e-07!365;UBERON:0001003!6.88e-07!14;UBERON:0007376!6.88e-07!14;UBERON:0007383!6.88e-07!14;UBERON:0001044!8.54e-07!6;UBERON:0003293!8.54e-07!6;UBERON:0003294!8.54e-07!6;UBERON:0010047!8.54e-07!6;UBERON:0000167!8.54e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.17e-14;2!UBERON:0001041;1.85e-11;14!UBERON:0001044;2.39e-10;6!UBERON:0003293;2.39e-10;6!UBERON:0003294;2.39e-10;6!UBERON:0010047;2.39e-10;6!UBERON:0003408;2.39e-10;6!UBERON:0000167;2.39e-10;6!UBERON:0002294;1.49e-08;7!UBERON:0001173;1.49e-08;7!UBERON:0001831;7.51e-08;1!UBERON:0001736;7.51e-08;1!UBERON:0001567;7.51e-08;1!UBERON:0004913;1.91e-07;1!UBERON:0003703;1.91e-07;1!UBERON:0001174;1.91e-07;1!UBERON:0004914;1.91e-07;1!UBERON:0002038;2.62e-07;1!UBERON:0000989;2.62e-07;1!UBERON:0001764;2.62e-07;1!UBERON:0008811;2.62e-07;1!UBERON:0001825;2.62e-07;1!UBERON:0009661;2.62e-07;1!UBERON:0002950;2.62e-07;1!UBERON:0001891;2.62e-07;1!UBERON:0002394;3.71e-07;4!UBERON:0003928;3.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.17e-14,2;UBERON:0001044,2.39e-10,6;UBERON:0003293,2.39e-10,6;UBERON:0003294,2.39e-10,6;UBERON:0010047,2.39e-10,6;UBERON:0000167,2.39e-10,6;UBERON:0001736,7.26e-08,1;UBERON:0006298,7.26e-08,1;UBERON:0001831,7.76e-08,1;UBERON:0001567,7.76e-08,1;UBERON:0008801,7.76e-08,1;UBERON:0004913,2.04e-07,1;UBERON:0003703,2.04e-07,1;UBERON:0001174,2.04e-07,1;UBERON:0004914,2.04e-07,1;UBERON:0002038,2.31e-07,1;UBERON:0009661,2.31e-07,1;UBERON:0002950,2.31e-07,1;UBERON:0001891,2.31e-07,1;UBERON:0009616,2.31e-07,1;UBERON:0010286,2.31e-07,1;UBERON:0000989,2.63e-07,1;UBERON:0008811,2.63e-07,1;UBERON:0006258,2.63e-07,1;UBERON:0005876,2.63e-07,1;UBERON:0004874,2.63e-07,1;UBERON:0001764,3.17e-07,1;UBERON:0001825,3.17e-07,1;UBERON:0002553,7.85e-07,61;UBERON:0002294,9.45e-07,9;UBERON:0001173,9.45e-07,9;UBERON:0004912,9.45e-07,9 | |||
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| ||
|short_description=p1@ENST00000451648 | |||
}} | }} |
Latest revision as of 16:12, 28 July 2015
Short description: | p1@ENST00000451648 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000451648_5end |
Coexpression cluster: | C1872_signet_Melanocyte_large_parotid_submaxillary_salivary_retina |
Association with transcript: | -15bp_to_ENST00000451648_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.37e-31 | 10 |
melanoblast | 2.37e-31 | 10 |
pigment cell | 3.70e-22 | 14 |
light melanocyte | 1.65e-20 | 3 |
neurecto-epithelial cell | 2.99e-15 | 20 |
columnar/cuboidal epithelial cell | 4.59e-11 | 27 |
ecto-epithelial cell | 4.93e-11 | 34 |
epithelial cell of stomach | 1.18e-09 | 3 |
dark melanocyte | 5.58e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.17e-14 | 2 |
saliva-secreting gland | 2.39e-10 | 6 |
gland of oral region | 2.39e-10 | 6 |
gland of foregut | 2.39e-10 | 6 |
oral gland | 2.39e-10 | 6 |
oral cavity | 2.39e-10 | 6 |
submandibular gland | 7.26e-08 | 1 |
submandibular gland primordium | 7.26e-08 | 1 |
parotid gland | 7.76e-08 | 1 |
cheek | 7.76e-08 | 1 |
parotid gland primordium | 7.76e-08 | 1 |
hepatopancreatic ampulla | 2.04e-07 | 1 |
extrahepatic bile duct | 2.04e-07 | 1 |
common bile duct | 2.04e-07 | 1 |
duodenal papilla | 2.04e-07 | 1 |
substantia nigra | 2.31e-07 | 1 |
midbrain nucleus | 2.31e-07 | 1 |
regional part of midbrain | 2.31e-07 | 1 |
midbrain | 2.31e-07 | 1 |
presumptive midbrain | 2.31e-07 | 1 |
midbrain neural tube | 2.31e-07 | 1 |
penis | 2.63e-07 | 1 |
intromittent organ | 2.63e-07 | 1 |
lateral plate mesenchyme | 2.63e-07 | 1 |
undifferentiated genital tubercle | 2.63e-07 | 1 |
somatopleure | 2.63e-07 | 1 |
maxillary sinus | 3.17e-07 | 1 |
paranasal sinus | 3.17e-07 | 1 |
anatomical cavity | 7.85e-07 | 61 |
biliary system | 9.45e-07 | 9 |
biliary tree | 9.45e-07 | 9 |
biliary bud | 9.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.54e-14 | 2 |
melanoma | 2.24e-13 | 2 |
cystadenocarcinoma | 1.39e-07 | 1 |
mucinous cystadenocarcinoma | 1.39e-07 | 1 |
paranasal sinus cancer | 3.17e-07 | 1 |
maxillary sinus cancer | 3.17e-07 | 1 |