FFCP PHASE1:Hg19::chr20:6033732..6033760,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:6033732..6033760,-
|short_description=p8@AB527789
|description=CAGE_peak_8_at_AB527789_5end
|association_with_transcript=-283bp_to_AB527789_5end
|EntrezG...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-283bp_to_AB527789_5end | |||
|cluster_id=chr20:6033732..6033760,- | |||
|coexpression_cluster_id=C463 | |||
|description=CAGE_peak_8_at_AB527789_5end | |||
|id=chr20:6033732..6033760,- | |||
|ontology_enrichment_celltype=CL:1000507!7.12e-27!12;CL:1000494!7.12e-27!12;CL:1000449!4.52e-20!16;CL:1000497!8.44e-18!18;CL:0002518!8.44e-18!18;CL:0000077!3.67e-17!19;CL:0000650!3.36e-13!3;CL:1000618!3.36e-13!3;CL:1001318!3.36e-13!3;CL:0002173!3.36e-13!3;CL:1000500!3.36e-13!3;CL:0000239!5.15e-13!3;CL:1000615!5.15e-13!3;CL:0002306!5.15e-13!3;CL:0002681!1.99e-11!13;CL:0002584!1.99e-11!13;CL:0000669!2.83e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.17e-17;2!CL:1000500;1.17e-17;2!CL:1000618;1.17e-17;2!CL:1001318;1.17e-17;2!CL:0002173;1.17e-17;2!CL:0000077;1.84e-16;19!CL:0000669;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.27e-17,2;CL:1000500,1.27e-17,2;CL:1000618,1.27e-17,2;CL:1001318,1.27e-17,2;CL:0002173,1.27e-17,2;CL:0000077,1.75e-16,19;CL:0000669,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.47e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!7.12e-27!12;UBERON:0001231!7.12e-27!12;UBERON:0004810!7.12e-27!12;UBERON:0004211!4.52e-20!16;UBERON:0001285!4.52e-20!16;UBERON:0007684!4.52e-20!16;UBERON:0003220!4.52e-20!16;UBERON:0004208!4.52e-20!16;UBERON:0006555!7.20e-19!17;UBERON:0005103!7.20e-19!17;UBERON:0000083!7.20e-19!17;UBERON:0009201!7.20e-19!17;UBERON:0004819!7.20e-19!17;UBERON:0006553!7.20e-19!17;UBERON:0003074!7.20e-19!17;UBERON:0003060!7.20e-19!17;UBERON:0000080!8.44e-18!18;UBERON:0002120!8.44e-18!18;UBERON:0004875!8.44e-18!18;UBERON:0005721!8.44e-18!18;UBERON:0005754!8.44e-18!18;UBERON:0007297!8.44e-18!18;UBERON:0004876!5.56e-16!20;UBERON:0002113!1.05e-15!27;UBERON:0003918!1.05e-15!27;UBERON:0005095!1.05e-15!27;UBERON:0007687!1.05e-15!27;UBERON:0003887!3.35e-15!21;UBERON:0003064!1.20e-14!37;UBERON:0001851!4.94e-14!16;UBERON:0003567!3.36e-13!3;UBERON:0003838!3.36e-13!3;UBERON:0005169!3.36e-13!3;UBERON:0002321!3.36e-13!3;UBERON:0005215!3.36e-13!3;UBERON:0002303!3.36e-13!3;UBERON:0002319!3.36e-13!3;UBERON:0000489!3.84e-13!32;UBERON:0006853!5.15e-13!3;UBERON:0007685!5.15e-13!3;UBERON:0004134!5.15e-13!3;UBERON:0000058!3.37e-12!26;UBERON:0006554!3.91e-12!44;UBERON:0001008!7.64e-12!45;UBERON:0001225!1.99e-11!13;UBERON:0008987!1.99e-11!13;UBERON:0005172!1.67e-09!55;UBERON:0005173!1.67e-09!55;UBERON:0000353!8.85e-09!17;UBERON:0002417!1.80e-08!61;UBERON:0000916!1.80e-08!61;UBERON:0003891!2.83e-08!5;UBERON:0003586!2.83e-08!5;UBERON:0003886!3.56e-08!63;UBERON:0002553!2.95e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.17e-17;2!UBERON:0003838;1.17e-17;2!UBERON:0003586;1.17e-17;2!UBERON:0005169;1.17e-17;2!UBERON:0002321;1.17e-17;2!UBERON:0005215;1.17e-17;2!UBERON:0002303;1.17e-17;2!UBERON:0002319;1.17e-17;2!UBERON:0003891;1.63e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.27e-17,2;UBERON:0003838,1.27e-17,2;UBERON:0003586,1.27e-17,2;UBERON:0005169,1.27e-17,2;UBERON:0002321,1.27e-17,2;UBERON:0005215,1.27e-17,2;UBERON:0002303,1.27e-17,2;UBERON:0002319,1.27e-17,2;UBERON:0003891,1.70e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,2.61460037580088,6.59821741801577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0.784349769176855,0,0.422206515571503,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.751288044986092,1.90402606084398,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,2.44106993273063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,2.61460037580088,6.59821741801577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0.784349769176855,0,0.422206515571503,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.751288044986092,1.90402606084398,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,2.44106993273063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@AB527789 | |||
}} | }} |
Latest revision as of 16:04, 28 July 2015
Short description: | p8@AB527789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AB527789_5end |
Coexpression cluster: | C463_Mesothelial_mesothelioma_Sertoli_mesenchymal_vagina_Cardiac_Fibroblast |
Association with transcript: | -283bp_to_AB527789_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.27e-17 | 2 |
kidney interstitial cell | 1.27e-17 | 2 |
juxtaglomerular complex cell | 1.27e-17 | 2 |
renal interstitial pericyte | 1.27e-17 | 2 |
extraglomerular mesangial cell | 1.27e-17 | 2 |
mesothelial cell | 1.75e-16 | 19 |
pericyte cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 1.27e-17 | 2 |
abdominal segment connective tissue | 1.27e-17 | 2 |
trunk connective tissue | 1.27e-17 | 2 |
interstitial tissue | 1.27e-17 | 2 |
extraglomerular mesangium | 1.27e-17 | 2 |
kidney interstitium | 1.27e-17 | 2 |
juxtaglomerular apparatus | 1.27e-17 | 2 |
mesangium | 1.27e-17 | 2 |
stroma | 1.70e-09 | 4 |