FFCP PHASE1:Hg19::chr20:58615689..58615712,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:58615689..58615712,+ | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_at_chr20:58615689..58615712,+ | |||
|id=chr20:58615689..58615712,+ | |||
|ontology_enrichment_celltype=CL:0000223!6.71e-12!59;CL:0002076!3.16e-11!43;CL:0000066!1.01e-10!254;CL:0002231!6.57e-10!3;CL:0000039!2.45e-09!7;CL:0000586!2.45e-09!7;CL:0002336!4.71e-08!1;CL:0002261!4.71e-08!1;CL:0002170!4.71e-08!1;CL:0002563!6.65e-08!4;CL:0002251!6.75e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002231;2.74e-12;3!CL:0000083;1.50e-09;4!CL:0002563;1.50e-09;4!CL:0000312;6.78e-08;5!CL:0000240;8.72e-07;6!CL:0000311;8.72e-07;6!CL:0000079;8.72e-07;6!CL:0000237;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.59e-12,3;CL:0000223,1.16e-09,58;CL:0000083,1.57e-09,4;CL:0002563,1.70e-09,4;CL:0000312,6.13e-08,5;CL:0000240,8.02e-07,6;CL:0000311,8.02e-07,6;CL:0000079,8.02e-07,6;CL:0000237,8.02e-07,6;CL:0000036,8.02e-07,6;CL:0000357,8.02e-07,6;CL:0000114,8.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.38e-07;58!CL:0000357;8.72e-07;6!CL:0000114;8.72e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.15e-11!14;DOID:305!9.51e-10!106;DOID:225!5.40e-08!1;DOID:0050687!1.20e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4074;9.86e-18;2!DOID:4905;9.86e-18;2!DOID:3498;9.86e-18;2!DOID:1793;1.50e-09;4!DOID:170;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.07e-17,2;DOID:4905,1.07e-17,2;DOID:3498,1.07e-17,2;DOID:1793,1.57e-09,4;DOID:170,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.57e-14!12;UBERON:0003729!1.40e-12!5;UBERON:0002084!2.90e-08!1;UBERON:0002082!2.90e-08!1;UBERON:0004706!2.90e-08!1;UBERON:0004913!4.11e-08!1;UBERON:0003703!4.11e-08!1;UBERON:0001174!4.11e-08!1;UBERON:0004914!4.11e-08!1;UBERON:0004119!4.44e-08!169;UBERON:0000925!4.44e-08!169;UBERON:0006595!4.44e-08!169;UBERON:0001242!6.65e-08!4;UBERON:0001262!6.65e-08!4;UBERON:0004786!6.65e-08!4;UBERON:0004808!6.65e-08!4;UBERON:0001277!6.65e-08!4;UBERON:0001052!9.01e-08!4;UBERON:0003343!1.44e-07!4;UBERON:0004785!1.44e-07!4;UBERON:0001007!8.72e-07!155;UBERON:0001555!8.72e-07!155;UBERON:0007026!8.72e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.50e-09;4!UBERON:0001262;1.50e-09;4!UBERON:0004786;1.50e-09;4!UBERON:0004808;1.50e-09;4!UBERON:0001277;1.50e-09;4!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0003101,5.24e-07,22;UBERON:0000079,5.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,1.91005047582099,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,1.76098157038881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,3.12442658418473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:58615689..58615712,+ | |||
}} |
Latest revision as of 15:58, 28 July 2015
Short description: | p@chr20:58615689..58615712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:58615689..58615712, + |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.59e-12 | 3 |
endodermal cell | 1.16e-09 | 58 |
epithelial cell of pancreas | 1.57e-09 | 4 |
intestinal epithelial cell | 1.70e-09 | 4 |
keratinocyte | 6.13e-08 | 5 |
stratified squamous epithelial cell | 8.02e-07 | 6 |
keratin accumulating cell | 8.02e-07 | 6 |
stratified epithelial cell | 8.02e-07 | 6 |
keratinizing barrier epithelial cell | 8.02e-07 | 6 |
epithelial fate stem cell | 8.02e-07 | 6 |
stratified epithelial stem cell | 8.02e-07 | 6 |
surface ectodermal cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.70e-09 | 4 |
wall of intestine | 1.70e-09 | 4 |
gastrointestinal system mucosa | 1.70e-09 | 4 |
gastrointestinal system epithelium | 1.70e-09 | 4 |
intestinal epithelium | 1.70e-09 | 4 |
male organism | 5.24e-07 | 22 |
male reproductive system | 5.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.07e-17 | 2 |
pancreatic carcinoma | 1.07e-17 | 2 |
pancreatic ductal adenocarcinoma | 1.07e-17 | 2 |
pancreatic cancer | 1.57e-09 | 4 |
endocrine gland cancer | 8.97e-07 | 6 |